Information for 3-CGCGCAYGCGCRC (Motif 4)

A G T C C T A G T G A C T C A G A T G C T C G A A G T C A C T G A G T C T A C G A G T C T C G A T A G C
Reverse Opposite:
A T C G A G C T A C T G A T G C T C A G G T A C T C A G A G C T A T C G A G T C A C T G A G T C T C A G
p-value:1e-11
log p-value:-2.535e+01
Information Content per bp:1.715
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif6.93%
Number of Background Sequences with motif1273.8
Percentage of Background Sequences with motif2.68%
Average Position of motif in Targets51.7 +/- 24.8bp
Average Position of motif in Background49.6 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:CGCGCAYGCGCRC
TGCGCAGGCGC--
 A G T C C T A G T G A C T C A G A T G C T C G A A G T C A C T G A G T C T A C G A G T C T C G A T A G C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:CGCGCAYGCGCRC
-GCGCATGCGCAG
 A G T C C T A G T G A C T C A G A T G C T C G A A G T C A C T G A G T C T A C G A G T C T C G A T A G C
A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

NRF(NRF)/Promoter/Homer

Match Rank:3
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:CGCGCAYGCGCRC
-GCGCATGCGCAC
 A G T C C T A G T G A C T C A G A T G C T C G A A G T C A C T G A G T C T A C G A G T C T C G A T A G C
A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CGCGCAYGCGCRC--
TGGCGCGCGCGCCTGA
 A C G T A G T C C T A G T G A C T C A G A T G C T C G A A G T C A C T G A G T C T A C G A G T C T C G A T A G C A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

Hes1/MA1099.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CGCGCAYGCGCRC
--GGCACGCGTC-
 A G T C C T A G T G A C T C A G A T G C T C G A A G T C A C T G A G T C T A C G A G T C T C G A T A G C
A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C A C G T

EGR3/MA0732.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGCGCAYGCGCRC-
CTACGCCCACGCACT
 A C G T A G T C C T A G T G A C T C A G A T G C T C G A A G T C A C T G A G T C T A C G A G T C T C G A T A G C A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

EGR2/MA0472.2/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGCGCAYGCGCRC
-ACGCCCACGCA-
 A G T C C T A G T G A C T C A G A T G C T C G A A G T C A C T G A G T C T A C G A G T C T C G A T A G C
A C G T G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T

Tcfl5/MA0632.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGCGCAYGCGCRC
--GGCACGTGCC-
 A G T C C T A G T G A C T C A G A T G C T C G A A G T C A C T G A G T C T A C G A G T C T C G A T A G C
A C G T A C G T C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T

EGR4/MA0733.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGCGCAYGCGCRC--
TTACGCCCACGCATTT
 A C G T A G T C C T A G T G A C T C A G A T G C T C G A A G T C A C T G A G T C T A C G A G T C T C G A T A G C A C G T A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CGCGCAYGCGCRC
----CACGCA---
 A G T C C T A G T G A C T C A G A T G C T C G A A G T C A C T G A G T C T A C G A G T C T C G A T A G C
A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T