Information for 1-GGCCCCCGGGCGTCCG (Motif 3)

A C T G A C T G A T G C A G T C A G T C A G T C G T A C A C T G A C T G A C T G A T G C A C T G A G C T A T G C A G T C A C T G
Reverse Opposite:
A G T C C T A G A T C G C T G A G T A C A T C G A G T C A G T C A G T C A C T G C T A G A C T G T A C G A T C G A G T C A G T C
p-value:1e-11
log p-value:-2.640e+01
Information Content per bp:1.852
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.0 +/- 25.8bp
Average Position of motif in Background58.4 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGCCCCCGGGCGTCCG
TGCCCCCGGGCA----
 A C T G A C T G A T G C A G T C A G T C A G T C G T A C A C T G A C T G A C T G A T G C A C T G A G C T A T G C A G T C A C T G
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGCCCCCGGGCGTCCG
NTGCCCTAGGGCAA---
 A C G T A C T G A C T G A T G C A G T C A G T C A G T C G T A C A C T G A C T G A C T G A T G C A C T G A G C T A T G C A G T C A C T G
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A A C G T A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCCCCCGGGCGTCCG
TGCCCTNGGGCA----
 A C T G A C T G A T G C A G T C A G T C A G T C G T A C A C T G A C T G A C T G A T G C A C T G A G C T A T G C A G T C A C T G
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGCCCCCGGGCGTCCG
TGCCCCAGGGCA----
 A C T G A C T G A T G C A G T C A G T C A G T C G T A C A C T G A C T G A C T G A T G C A C T G A G C T A T G C A G T C A C T G
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T A C G T A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGCCCCCGGGCGTCCG
ACCCCCCCGGGGGGN--
 A C G T A C T G A C T G A T G C A G T C A G T C A G T C G T A C A C T G A C T G A C T G A T G C A C T G A G C T A T G C A G T C A C T G
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGCCCCCGGGCGTCCG
NCCCCCCCGGGGGGN--
 A C G T A C T G A C T G A T G C A G T C A G T C A G T C G T A C A C T G A C T G A C T G A T G C A C T G A G C T A T G C A G T C A C T G
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCCCCCGGGCGTCCG
GGGGCCCAAGGGGG----
 A C G T A C G T A C T G A C T G A T G C A G T C A G T C A G T C G T A C A C T G A C T G A C T G A T G C A C T G A G C T A T G C A G T C A C T G
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G A C G T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGCCCCCGGGCGTCCG
CCCCCCCGGGGGNN--
 A C T G A C T G A T G C A G T C A G T C A G T C G T A C A C T G A C T G A C T G A T G C A C T G A G C T A T G C A G T C A C T G
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGCCCCCGGGCGTCCG
NTGCCCTTGGGCGN---
 A C G T A C T G A C T G A T G C A G T C A G T C A G T C G T A C A C T G A C T G A C T G A T G C A C T G A G C T A T G C A G T C A C T G
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGCCCCCGGGCGTCCG
GTCCCCAGGGGA----
 A C T G A C T G A T G C A G T C A G T C A G T C G T A C A C T G A C T G A C T G A T G C A C T G A G C T A T G C A G T C A C T G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T