Information for 1-GTTGATCCTA (Motif 1)

C T A G A C G T A C G T A C T G C G T A A C G T G T A C A G T C A C G T C G T A
Reverse Opposite:
A C G T G T C A A C T G A C T G C G T A C G A T A G T C G T C A C G T A A G T C
p-value:1e-13
log p-value:-3.102e+01
Information Content per bp:1.853
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.1 +/- 23.6bp
Average Position of motif in Background66.5 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GTTGATCCTA
NTATYGATCH--
 A C G T A C G T C T A G A C G T A C G T A C T G C G T A A C G T G T A C A G T C A C G T C G T A
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTTGATCCTA
-ATAATCCC-
 C T A G A C G T A C G T A C T G C G T A A C G T G T A C A G T C A C G T C G T A
A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTTGATCCTA----
GATAACATCCTAGTAG
 A C G T A C G T C T A G A C G T A C G T A C T G C G T A A C G T G T A C A G T C A C G T C G T A A C G T A C G T A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTTGATCCTA
ATTGATTYND
 C T A G A C G T A C G T A C T G C G T A A C G T G T A C A G T C A C G T C G T A
C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTTGATCCTA-
NTTGATACATT
 C T A G A C G T A C G T A C T G C G T A A C G T G T A C A G T C A C G T C G T A A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GTTGATCCTA
NNANTGATTGATNTTN
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C T G C G T A A C G T G T A C A G T C A C G T C G T A
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PB0125.1_Gata3_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTTGATCCTA--------
TTTTGTAGATTTTATCGACTTA
 A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C T G C G T A A C G T G T A C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A C G T G C A T C A G T T C A G A G C T G C T A C T A G G C T A G A C T C G A T A C G T G A C T C T G A A C G T G A T C C T A G T C G A A T G C C G A T G C A T G T C A

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GTTGATCCTA
NNANTGATTGATNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C T G C G T A A C G T G T A C A G T C A C G T C G T A
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTTGATCCTA
GTGGAT----
 C T A G A C G T A C G T A C T G C G T A A C G T G T A C A G T C A C G T C G T A
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T

PH0014.1_Cphx/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTTGATCCTA----
NTTGATTNNATCAN
 C T A G A C G T A C G T A C T G C G T A A C G T G T A C A G T C A C G T C G T A A C G T A C G T A C G T A C G T
C G A T A G C T C G A T C T A G C G T A A C G T A C G T A T G C T A C G G T C A A C G T A G T C C G T A G A C T