Information for 1-CCGCGGCACT (Motif 8)

A T G C T G A C A T C G G T A C A C T G C T A G T G A C G C T A T G A C A C G T
Reverse Opposite:
T G C A A C T G C G A T A C T G G A T C T G A C C A T G T A G C A C T G T A C G
p-value:1e-9
log p-value:-2.087e+01
Information Content per bp:1.658
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif7.56%
Number of Background Sequences with motif1630.1
Percentage of Background Sequences with motif3.34%
Average Position of motif in Targets51.7 +/- 27.3bp
Average Position of motif in Background48.9 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CCGCGGCACT
ATTGCCTCAGGCAAT
 A C G T A C G T A C G T A C G T A C G T A T G C T G A C A T C G G T A C A C T G C T A G T G A C G C T A T G A C A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCGCGGCACT----
----RSCACTYRAG
 A T G C T G A C A T C G G T A C A C T G C T A G T G A C G C T A T G A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCGCGGCACT---
---MRSCACTYAA
 A T G C T G A C A T C G G T A C A C T G C T A G T G A C G C T A T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCGCGGCACT---
---AASCACTCAA
 A T G C T G A C A T C G G T A C A C T G C T A G T G A C G C T A T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCGCGGCACT---
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A T G C T G A C A T C G G T A C A C T G C T A G T G A C G C T A T G A C A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CCGCGGCACT----
----NSCACTYVAV
 A T G C T G A C A T C G G T A C A C T G C T A G T G A C G C T A T G A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCGCGGCACT---
---AAGCACTTAA
 A T G C T G A C A T C G G T A C A C T G C T A G T G A C G C T A T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CCGCGGCACT----
-----CCACTTGAA
 A T G C T G A C A T C G G T A C A C T G C T A G T G A C G C T A T G A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

ETV6/MA0645.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCGCGGCACT-
-AGCGGAAGTG
 A T G C T G A C A T C G G T A C A C T G C T A G T G A C G C T A T G A C A C G T A C G T
A C G T T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCGCGGCACT----
--RGGGCACTAACY
 A T G C T G A C A T C G G T A C A C T G C T A G T G A C G C T A T G A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T