Information for 1-GCTCCGTGGGCTG (Motif 3)

A C T G A G T C A C G T G T A C A T G C C T A G C G A T A C T G A C T G A C T G A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A G T C A G T C A G T C C G T A A G T C A T C G A C T G G T C A A C T G A G T C
p-value:1e-10
log p-value:-2.405e+01
Information Content per bp:1.903
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.6 +/- 23.9bp
Average Position of motif in Background58.1 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCTCCGTGGGCTG
TGCCCTNAGGGCA-
 A C G T A C T G A G T C A C G T G T A C A T G C C T A G C G A T A C T G A C T G A C T G A G T C A C G T A C T G
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTCCGTGGGCTG
GCTCCG-------
 A C T G A G T C A C G T G T A C A T G C C T A G C G A T A C T G A C T G A C T G A G T C A C G T A C T G
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCTCCGTGGGCTG
TGCCCTGAGGGCA-
 A C G T A C T G A G T C A C G T G T A C A T G C C T A G C G A T A C T G A C T G A C T G A G T C A C G T A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCTCCGTGGGCTG-
--NGCGTGGGCGGR
 A C T G A G T C A C G T G T A C A T G C C T A G C G A T A C T G A C T G A C T G A G T C A C G T A C T G A C G T
A C G T A C G T A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCTCCGTGGGCTG
TGCCCTGAGGGCA-
 A C G T A C T G A G T C A C G T G T A C A T G C C T A G C G A T A C T G A C T G A C T G A G T C A C G T A C T G
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

EGR2/MA0472.2/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCTCCGTGGGCTG
--TGCGTGGGCGT
 A C T G A G T C A C G T G T A C A T G C C T A G C G A T A C T G A C T G A C T G A G T C A C G T A C T G
A C G T A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GCTCCGTGGGCTG----
-----GTGGCGTGACNG
 A C T G A G T C A C G T G T A C A T G C C T A G C G A T A C T G A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

GLIS1/MA0735.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCTCCGTGGGCTG---
GCTTCGTGGGGGGTCT
 A C T G A G T C A C G T G T A C A T G C C T A G C G A T A C T G A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C G T
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T

SREBF2/MA0596.1/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GCTCCGTGGGCTG--
-----ATGGGGTGAT
 A C T G A G T C A C G T G T A C A T G C C T A G C G A T A C T G A C T G A C T G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCTCCGTGGGCTG
GGGGCCGAGGCCTG
 A C G T A C T G A G T C A C G T G T A C A T G C C T A G C G A T A C T G A C T G A C T G A G T C A C G T A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G