Information for 10-CGCCTGCGAT (Motif 23)

A G T C C A T G A T G C A T G C C A G T A T C G A G T C T A C G C G T A G C A T
Reverse Opposite:
C G T A G C A T A T G C T C A G T A G C G T C A A T C G T A C G G T A C T C A G
p-value:1e-6
log p-value:-1.440e+01
Information Content per bp:1.663
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif6.78%
Number of Background Sequences with motif1666.1
Percentage of Background Sequences with motif3.41%
Average Position of motif in Targets52.6 +/- 27.5bp
Average Position of motif in Background49.1 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CGCCTGCGAT
GCGCCTGCGCA
 A C G T A G T C C A T G A T G C A T G C C A G T A T C G A G T C T A C G C G T A G C A T
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGCCTGCGAT
NNCACCTGNN--
 A C G T A C G T A G T C C A T G A T G C A T G C C A G T A T C G A G T C T A C G C G T A G C A T
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CGCCTGCGAT
CTGCGCATGCGC-
 A C G T A C G T A C G T A G T C C A T G A T G C A T G C C A G T A T C G A G T C T A C G C G T A G C A T
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CGCCTGCGAT
SNGCACCTGCHS-
 A C G T A C G T A C G T A G T C C A T G A T G C A T G C C A G T A T C G A G T C T A C G C G T A G C A T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

TCF3/MA0522.2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CGCCTGCGAT
AACACCTGCT--
 A C G T A C G T A G T C C A T G A T G C A T G C C A G T A T C G A G T C T A C G C G T A G C A T
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGCCTGCGAT
GTGCGCATGCGC-
 A C G T A C G T A C G T A G T C C A T G A T G C A T G C C A G T A T C G A G T C T A C G C G T A G C A T
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGCCTGCGAT
CGCACCTGCT--
 A C G T A C G T A G T C C A T G A T G C A T G C C A G T A T C G A G T C T A C G C G T A G C A T
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGCCTGCGAT
TACACCTGTC--
 A C G T A C G T A G T C C A T G A T G C A T G C C A G T A T C G A G T C T A C G C G T A G C A T
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGCCTGCGAT
--GCTGTG--
 A G T C C A T G A T G C A T G C C A G T A T C G A G T C T A C G C G T A G C A T
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGCCTGCGAT
NCACCTGTN--
 A C G T A G T C C A T G A T G C A T G C C A G T A T C G A G T C T A C G C G T A G C A T
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T