Information for 4-GCCCCGGCTTCTTGCG (Motif 13)

A C T G A G T C A G T C A T G C A G T C A C T G A C T G A G T C A C G T A C G T A G T C A G C T A C G T C T A G A G T C A T C G
Reverse Opposite:
A T G C A C T G A G T C C G T A C T G A C T A G G T C A C G T A C T A G A G T C A G T C A C T G A T C G C T A G A C T G A G T C
p-value:1e-8
log p-value:-1.932e+01
Information Content per bp:1.897
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.8 +/- 35.9bp
Average Position of motif in Background53.4 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCGGCTTCTTGCG
ATGCCCGGGCATGT----
 A C G T A C G T A C T G A G T C A G T C A T G C A G T C A C T G A C T G A G T C A C G T A C G T A G T C A G C T A C G T C T A G A G T C A T C G
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GCCCCGGCTTCTTGCG
GGGGCCGAGGCCTG-----
 A C G T A C G T A C G T A C T G A G T C A G T C A T G C A G T C A C T G A C T G A G T C A C G T A C G T A G T C A G C T A C G T C T A G A G T C A T C G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCCCCGGCTTCTTGCG
GCCCCGCCCCCTCCC-
 A C T G A G T C A G T C A T G C A G T C A C T G A C T G A G T C A C G T A C G T A G T C A G C T A C G T C T A G A G T C A T C G
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCCCCGGCTTCTTGCG
--GCCGCCATCTTG--
 A C T G A G T C A G T C A T G C A G T C A C T G A C T G A G T C A C G T A C G T A G T C A G C T A C G T C T A G A G T C A T C G
A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GCCCCGGCTTCTTGCG
GGCCCCGCCCCC-----
 A C G T A C T G A G T C A G T C A T G C A G T C A C T G A C T G A G T C A C G T A C G T A G T C A G C T A C G T C T A G A G T C A T C G
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GCCCCGGCTTCTTGCG
TGCCCAGNHW-------
 A C G T A C T G A G T C A G T C A T G C A G T C A C T G A C T G A G T C A C G T A C G T A G T C A G C T A C G T C T A G A G T C A T C G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---GCCCCGGCTTCTTGCG
NNGGCCACGCCTTTN----
 A C G T A C G T A C G T A C T G A G T C A G T C A T G C A G T C A C T G A C T G A G T C A C G T A C G T A G T C A G C T A C G T C T A G A G T C A T C G
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:8
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---GCCCCGGCTTCTTGCG
TCCGCCCCCGCATT-----
 A C G T A C G T A C G T A C T G A G T C A G T C A T G C A G T C A C T G A C T G A G T C A C G T A C G T A G T C A G C T A C G T C T A G A G T C A T C G
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GCCCCGGCTTCTTGCG
GTCATGCHTGRCTGS-
 A C T G A G T C A G T C A T G C A G T C A C T G A C T G A G T C A C G T A C G T A G T C A G C T A C G T C T A G A G T C A T C G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T

SP4/MA0685.1/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---GCCCCGGCTTCTTGCG
TAAGCCACGCCCCCTTT--
 A C G T A C G T A C G T A C T G A G T C A G T C A T G C A G T C A C T G A C T G A G T C A C G T A C G T A G T C A G C T A C G T C T A G A G T C A T C G
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T A C G T A C G T