Information for 9-CGTCAGCTTCGCC (Motif 19)

A G T C A C T G A C G T A G T C C T G A A C T G A G T C A C G T A C G T A G T C A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C T G C G T A G T C A A C T G A G T C A G C T A C T G G T C A T A G C A C T G
p-value:1e-8
log p-value:-1.856e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets28.7 +/- 16.1bp
Average Position of motif in Background37.5 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CGTCAGCTTCGCC
-----GCTTCC--
 A G T C A C T G A C G T A G T C C T G A A C T G A G T C A C G T A C G T A G T C A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CGTCAGCTTCGCC----
-----GCTCCGCCCMCY
 A G T C A C T G A C G T A G T C C T G A A C T G A G T C A C G T A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGTCAGCTTCGCC
-CGCAGCTGCG--
 A G T C A C T G A C G T A G T C C T G A A C T G A G T C A C G T A C G T A G T C A C T G A G T C A G T C
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CGTCAGCTTCGCC----
---NAGCCCCGCCCCCN
 A G T C A C T G A C G T A G T C C T G A A C T G A G T C A C G T A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

PB0003.1_Ascl2_1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGTCAGCTTCGCC--
CTCAGCAGCTGCTACTG
 A C G T A C G T A G T C A C T G A C G T A G T C C T G A A C T G A G T C A C G T A C G T A G T C A C T G A G T C A G T C A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CGTCAGCTTCGCC---
----GGCCCCGCCCCC
 A G T C A C T G A C G T A G T C C T G A A C T G A G T C A C G T A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CGTCAGCTTCGCC
TGAGTCAGCA-----
 A C G T A C G T A G T C A C T G A C G T A G T C C T G A A C T G A G T C A C G T A C G T A G T C A C T G A G T C A G T C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CGTCAGCTTCGCC
CAACGTCCGCGG----
 A C G T A C G T A C G T A G T C A C T G A C G T A G T C C T G A A C T G A G T C A C G T A C G T A G T C A C T G A G T C A G T C
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CGTCAGCTTCGCC-----
---NRGCCCCRCCCHBNN
 A G T C A C T G A C G T A G T C C T G A A C T G A G T C A C G T A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CGTCAGCTTCGCC
ACGTCA--------
 A C G T A G T C A C T G A C G T A G T C C T G A A C T G A G T C A C G T A C G T A G T C A C T G A G T C A G T C
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T