Information for 8-CTGCTGTGGGAAC (Motif 17)

T A G C A C G T A C T G A G T C C A G T A T C G C A G T A C T G T C A G C T A G T C G A T C G A A T G C
Reverse Opposite:
A T C G A G C T A G C T A G T C A G T C G T A C G T C A A T G C G T C A C T A G G T A C T G C A A T C G
p-value:1e-8
log p-value:-1.910e+01
Information Content per bp:1.716
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.31%
Number of Background Sequences with motif476.4
Percentage of Background Sequences with motif0.98%
Average Position of motif in Targets46.1 +/- 27.0bp
Average Position of motif in Background49.9 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGTGGGAAC
CCCCCTGCTGTG-----
 A C G T A C G T A C G T A C G T T A G C A C G T A C T G A G T C C A G T A T C G C A G T A C T G T C A G C T A G T C G A T C G A A T G C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTGCTGTGGGAAC-
----CSTGGGAAAD
 T A G C A C G T A C T G A G T C C A G T A T C G C A G T A C T G T C A G C T A G T C G A T C G A A T G C A C G T
A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGTGGGAAC
TNTCCTGCTGTGNNG--
 A C G T A C G T A C G T A C G T T A G C A C G T A C T G A G T C C A G T A T C G C A G T A C T G T C A G C T A G T C G A T C G A A T G C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGTGGGAAC
TCNCCTGCTGNGNNN--
 A C G T A C G T A C G T A C G T T A G C A C G T A C T G A G T C C A G T A T C G C A G T A C T G T C A G C T A G T C G A T C G A A T G C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGCTGTGGGAAC
-TCCCCTGGGGAC
 T A G C A C G T A C T G A G T C C A G T A T C G C A G T A C T G T C A G C T A G T C G A T C G A A T G C
A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CTGCTGTGGGAAC
GGCCYCCTGCTGDGH----
 A C G T A C G T A C G T A C G T A C G T A C G T T A G C A C G T A C T G A G T C C A G T A T C G C A G T A C T G T C A G C T A G T C G A T C G A A T G C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTGCTGTGGGAAC--
ANTNCCGGGGGGAANTT
 A C G T A C G T T A G C A C G T A C T G A G T C C A G T A T C G C A G T A C T G T C A G C T A G T C G A T C G A A T G C A C G T A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTGCTGTGGGAAC-
TTGCCATGGCAACN
 T A G C A C G T A C T G A G T C C A G T A T C G C A G T A C T G T C A G C T A G T C G A T C G A A T G C A C G T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGTGGGAAC
NNTCCTGCTGTGNNN--
 A C G T A C G T A C G T A C G T T A G C A C G T A C T G A G T C C A G T A T C G C A G T A C T G T C A G C T A G T C G A T C G A A T G C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTGCTGTGGGAAC
GGGGCTYGKCTGGGA--
 A C G T A C G T A C G T A C G T T A G C A C G T A C T G A G T C C A G T A T C G C A G T A C T G T C A G C T A G T C G A T C G A A T G C
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T