Information for 14-GTTTTCATAG (Motif 21)

A C T G G A C T A G C T G A C T A C G T A G T C C G T A G C A T C T G A T C A G
Reverse Opposite:
A G T C G A C T C G T A G C A T T C A G T G C A C T G A T C G A C T G A G T A C
p-value:1e-8
log p-value:-2.063e+01
Information Content per bp:1.673
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif5.67%
Number of Background Sequences with motif941.6
Percentage of Background Sequences with motif2.01%
Average Position of motif in Targets52.0 +/- 28.9bp
Average Position of motif in Background49.4 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GTTTTCATAG
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T A C T G G A C T A G C T G A C T A C G T A G T C C G T A G C A T C T G A T C A G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GTTTTCATAG
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A C G T A C G T A C T G G A C T A G C T G A C T A C G T A G T C C G T A G C A T C T G A T C A G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTTTTCATAG
TGGTTTCAGT-
 A C G T A C T G G A C T A G C T G A C T A C G T A G T C C G T A G C A T C T G A T C A G
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTTTTCATAG
CGGTTTCAAA-
 A C G T A C T G G A C T A G C T G A C T A C G T A G T C C G T A G C A T C T G A T C A G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTTTTCATAG----
NNANTTTTATTGGNNN
 A C G T A C G T A C T G G A C T A G C T G A C T A C G T A G T C C G T A G C A T C T G A T C A G A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GTTTTCATAG--
--TTTAATTGCN
 A C T G G A C T A G C T G A C T A C G T A G T C C G T A G C A T C T G A T C A G A C G T A C G T
A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

Arid3a/MA0151.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTTTTCATAG
--TTTAAT--
 A C T G G A C T A G C T G A C T A C G T A G T C C G T A G C A T C T G A T C A G
A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTTTTCATAG----
NSTGTTTRCWCAGBNNN
 A C G T A C G T A C G T A C T G G A C T A G C T G A C T A C G T A G T C C G T A G C A T C T G A T C A G A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

HOXB13/MA0901.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTTTTCATAG-
-NTTTTATTGG
 A C T G G A C T A G C T G A C T A C G T A G T C C G T A G C A T C T G A T C A G A C G T
A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

TATA-Box(TBP)/Promoter/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTTTTCATAG--
CCTTTTATAGNC
 A C T G G A C T A G C T G A C T A C G T A G T C C G T A G C A T C T G A T C A G A C G T A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C