Information for 1-WAACCACAKH (Motif 1)

G C T A C G T A C T G A A G T C A G T C C T G A A G T C C G T A C A G T G A T C
Reverse Opposite:
C T A G G T C A C G A T A C T G A G C T A C T G A C T G A G C T G C A T C G A T
p-value:1e-117
log p-value:-2.695e+02
Information Content per bp:1.689
Number of Target Sequences with motif276.0
Percentage of Target Sequences with motif34.80%
Number of Background Sequences with motif3184.4
Percentage of Background Sequences with motif6.79%
Average Position of motif in Targets50.2 +/- 25.4bp
Average Position of motif in Background50.9 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:forward strand
Alignment:WAACCACAKH
AAACCACANN
 G C T A C G T A C T G A A G T C A G T C C T G A A G T C C G T A C A G T G A T C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-WAACCACAKH
NAAACCACAG-
 A C G T G C T A C G T A C T G A A G T C A G T C C T G A A G T C C G T A C A G T G A T C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:WAACCACAKH
AAACCACAGC
 G C T A C G T A C T G A A G T C A G T C C T G A A G T C C G T A C A G T G A T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-WAACCACAKH-
NWAACCACADNN
 A C G T G C T A C G T A C T G A A G T C A G T C C T G A A G T C C G T A C A G T G A T C A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:WAACCACAKH-
AAACCACAGAN
 G C T A C G T A C T G A A G T C A G T C C T G A A G T C C G T A C A G T G A T C A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.90
Offset:0
Orientation:forward strand
Alignment:WAACCACAKH
AAACCGCAA-
 G C T A C G T A C T G A A G T C A G T C C T G A A G T C C G T A C A G T G A T C
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.89
Offset:0
Orientation:forward strand
Alignment:WAACCACAKH
AAACCGCAAA
 G C T A C G T A C T G A A G T C A G T C C T G A A G T C C G T A C A G T G A T C
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.74
Offset:1
Orientation:forward strand
Alignment:WAACCACAKH
-ATCCAC---
 G C T A C G T A C T G A A G T C A G T C C T G A A G T C C G T A C A G T G A T C
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---WAACCACAKH
TCCAATCCACA--
 A C G T A C G T A C G T G C T A C G T A C T G A A G T C A G T C C T G A A G T C C G T A C A G T G A T C
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--WAACCACAKH
SSAATCCACANN
 A C G T A C G T G C T A C G T A C T G A A G T C A G T C C T G A A G T C C G T A C A G T G A T C
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C