Information for 5-KCCGTGGTGCTGA (Motif 8)

A C T G A G T C G T A C C T A G C G A T A C T G A C T G A C G T A C T G A G T C A C G T A T C G G T C A
Reverse Opposite:
C A G T A T G C G T C A A C T G A G T C C G T A A G T C G T A C G C T A A G T C A C T G A C T G G T A C
p-value:1e-13
log p-value:-3.092e+01
Information Content per bp:1.836
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.8 +/- 22.0bp
Average Position of motif in Background37.3 +/- 3.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.78
Offset:-7
Orientation:forward strand
Alignment:-------KCCGTGGTGCTGA
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T A C C T A G C G A T A C T G A C T G A C G T A C T G A G T C A C G T A T C G G T C A
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.77
Offset:-7
Orientation:reverse strand
Alignment:-------KCCGTGGTGCTGA-
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T A C C T A G C G A T A C T G A C T G A C G T A C T G A G T C A C G T A T C G G T C A A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

NRL/MA0842.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:KCCGTGGTGCTGA-
---AATTTGCTGAC
 A C T G A G T C G T A C C T A G C G A T A C T G A C T G A C G T A C T G A G T C A C G T A T C G G T C A A C G T
A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.61
Offset:7
Orientation:forward strand
Alignment:KCCGTGGTGCTGA----
-------TGCTGACTCA
 A C T G A G T C G T A C C T A G C G A T A C T G A C T G A C G T A C T G A G T C A C G T A T C G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

MAFK/MA0496.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:KCCGTGGTGCTGA-----
---AAANTGCTGACTNAG
 A C T G A G T C G T A C C T A G C G A T A C T G A C T G A C G T A C T G A G T C A C G T A T C G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

Mafb/MA0117.2/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:KCCGTGGTGCTGA--
---AAAATGCTGACT
 A C T G A G T C G T A C C T A G C G A T A C T G A C T G A C G T A C T G A G T C A C G T A T C G G T C A A C G T A C G T
A C G T A C G T A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

PB0041.1_Mafb_1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:KCCGTGGTGCTGA------
--AAATTTGCTGACTTAGA
 A C T G A G T C G T A C C T A G C G A T A C T G A C T G A C G T A C T G A G T C A C G T A T C G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:KCCGTGGTGCTGA----
-----GGTGYTGACAGS
 A C T G A G T C G T A C C T A G C G A T A C T G A C T G A C G T A C T G A G T C A C G T A T C G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:KCCGTGGTGCTGA
-CCTTTGTT----
 A C T G A G T C G T A C C T A G C G A T A C T G A C T G A C G T A C T G A G T C A C G T A T C G G T C A
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:KCCGTGGTGCTGA
NCCATTGTTC---
 A C T G A G T C G T A C C T A G C G A T A C T G A C T G A C G T A C T G A G T C A C G T A T C G G T C A
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T