Information for 5-CGCCCTCTGC (Motif 5)

A G T C T A C G G T A C A G T C A T G C G A C T A G T C A C G T A T C G G T A C
Reverse Opposite:
A C T G A T G C T G C A C T A G C T G A A T C G T C A G C A T G A T G C A C T G
p-value:1e-14
log p-value:-3.305e+01
Information Content per bp:1.731
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif6.32%
Number of Background Sequences with motif819.5
Percentage of Background Sequences with motif1.73%
Average Position of motif in Targets48.8 +/- 28.6bp
Average Position of motif in Background49.4 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCTCTGC--
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T A C G T A G T C T A C G G T A C A G T C A T G C G A C T A G T C A C G T A T C G G T A C A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGCCCTCTGC----
TGACCTTTGCCCTA
 A G T C T A C G G T A C A G T C A T G C G A C T A G T C A C G T A T C G G T A C A C G T A C G T A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CGCCCTCTGC----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A C G G T A C A G T C A T G C G A C T A G T C A C G T A T C G G T A C A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGCCCTCTGC-----
TGACCTCTGACCCCN
 A G T C T A C G G T A C A G T C A T G C G A C T A G T C A C G T A T C G G T A C A C G T A C G T A C G T A C G T A C G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGCCCTCTGC-----
TGACCTTTGCCCTAN
 A G T C T A C G G T A C A G T C A T G C G A C T A G T C A C G T A T C G G T A C A C G T A C G T A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGCCCTCTGC----
TGACCTTTGCCCCA
 A G T C T A C G G T A C A G T C A T G C G A C T A G T C A C G T A T C G G T A C A C G T A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGCCCTCTGC
CTGACCTTTG-
 A C G T A G T C T A C G G T A C A G T C A T G C G A C T A G T C A C G T A T C G G T A C
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CGCCCTCTGC
GCCMCGCCCMCY--
 A C G T A C G T A C G T A C G T A G T C T A C G G T A C A G T C A T G C G A C T A G T C A C G T A T C G G T A C
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGCCCTCTGC--
CGCCCCCTGACA
 A G T C T A C G G T A C A G T C A T G C G A C T A G T C A C G T A T C G G T A C A C G T A C G T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGCCCTCTGC-
-GCCATCTGTT
 A G T C T A C G G T A C A G T C A T G C G A C T A G T C A C G T A T C G G T A C A C G T
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T