p-value: | 1e-14 |
log p-value: | -3.385e+01 |
Information Content per bp: | 1.718 |
Number of Target Sequences with motif | 10.0 |
Percentage of Target Sequences with motif | 1.22% |
Number of Background Sequences with motif | 9.1 |
Percentage of Background Sequences with motif | 0.02% |
Average Position of motif in Targets | 46.9 +/- 26.2bp |
Average Position of motif in Background | 37.1 +/- 21.3bp |
Strand Bias (log2 ratio + to - strand density) | -1.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 1 |
Score: | 0.75 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CVTCCCCATGGCGVCC --TTGCCATGGCAACN |
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X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 2 |
Score: | 0.70 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CVTCCCCATGGCGVCC --TTGCCATGGCAACC |
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Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
Match Rank: | 3 |
Score: | 0.70 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CVTCCCCATGGCGVCC -GTTGCCATGGCAACM |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 4 |
Score: | 0.70 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CVTCCCCATGGCGVCC -GTTGCCATGGCAAC- |
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RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
Match Rank: | 5 |
Score: | 0.69 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CVTCCCCATGGCGVCC- -GTTGCCATGGCAACCG |
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RFX4/MA0799.1/Jaspar
Match Rank: | 6 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CVTCCCCATGGCGVCC CGTTGCCATGGCAACG |
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RFX3/MA0798.1/Jaspar
Match Rank: | 7 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CVTCCCCATGGCGVCC CGTTGCCATGGCAACN |
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RFX2/MA0600.2/Jaspar
Match Rank: | 8 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CVTCCCCATGGCGVCC CGTTGCCATGGCAACG |
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RFX5/MA0510.2/Jaspar
Match Rank: | 9 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CVTCCCCATGGCGVCC CGTTGCCATGGCAACG |
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PB0113.1_E2F3_2/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | CVTCCCCATGGCGVCC---- ---NNNNTTGGCGCCGANNN |
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