Information for 4-GTGTGGTTTC (Motif 3)

A T C G A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T G A T C
Reverse Opposite:
C T A G G T C A G T C A T G C A A G T C A G T C G T C A G T A C C G T A T A G C
p-value:1e-21
log p-value:-5.001e+01
Information Content per bp:1.842
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif5.47%
Number of Background Sequences with motif395.8
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets48.4 +/- 25.5bp
Average Position of motif in Background49.8 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGGTTTC
NNTGTGGTTT-
 A C G T A T C G A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T G A T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GTGTGGTTTC
CTGTGGTTTN
 A T C G A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T G A T C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--GTGTGGTTTC
GTCTGTGGTTT-
 A C G T A C G T A T C G A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T G A T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-GTGTGGTTTC
GCTGTGGTTT-
 A C G T A T C G A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T G A T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGGTTTC
NNHTGTGGTTWN
 A C G T A C G T A T C G A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T G A T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGGTTTC
TTTGCGGTTT-
 A C G T A T C G A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T G A T C
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GTGTGGTTTC
TTGCGGTTT-
 A T C G A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T G A T C
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GTGTGGTTTC--
-TGTGGATTNNN
 A T C G A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T G A T C A C G T A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:GTGTGGTTTC---
---TGGTTTCAGT
 A T C G A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T G A T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GTGTGGTTTC-
NNTGTGGATTSS
 A C G T A T C G A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T G A T C A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G