Information for 9-AAGCGTTACT (Motif 10)

C G T A C T G A A C T G A G T C C T A G A C G T C G A T T C G A A G T C A C G T
Reverse Opposite:
C G T A A C T G A G C T C G T A C G T A G A T C A C T G A G T C A G C T A C G T
p-value:1e-9
log p-value:-2.246e+01
Information Content per bp:1.873
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif29.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets42.6 +/- 23.5bp
Average Position of motif in Background50.0 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0046.1_Mybl1_1/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AAGCGTTACT--
TTGAAAACCGTTAATTT
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C T G A G T C C T A G A C G T C G A T T C G A A G T C A C G T A C G T A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAGCGTTACT
CAAGCTT----
 A C G T C G T A C T G A A C T G A G T C C T A G A C G T C G A T T C G A A G T C A C G T
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0045.1_Myb_1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AAGCGTTACT--
ATGGAAACCGTTATTTT
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C T G A G T C C T A G A C G T C G A T T C G A A G T C A C G T A C G T A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAGCGTTACT--
CAAAGGCGTGGCCAG
 A C G T A C G T A C G T C G T A C T G A A C T G A G T C C T A G A C G T C G A T T C G A A G T C A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PAX1/MA0779.1/Jaspar

Match Rank:5
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------AAGCGTTACT
NGCANTCATGCGTGACG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C T G A G T C C T A G A C G T C G A T T C G A A G T C A C G T
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G

PAX9/MA0781.1/Jaspar

Match Rank:6
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------AAGCGTTACT
TGCAGTCATGCGTGACG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C T G A G T C C T A G A C G T C G A T T C G A A G T C A C G T
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAGCGTTACT------
-NCCGTTGCTANGNGN
 C G T A C T G A A C T G A G T C C T A G A C G T C G A T T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

Pax6/MA0069.1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----AAGCGTTACT
AANTCATGCGTGAA-
 A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C T G A G T C C T A G A C G T C G A T T C G A A G T C A C G T
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AAGCGTTACT
GCAGCCAAGCGTGACN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C T G A G T C C T A G A C G T C G A T T C G A A G T C A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

PAX5/MA0014.2/Jaspar

Match Rank:10
Score:0.55
Offset:-10
Orientation:forward strand
Alignment:----------AAGCGTTACT
GAGGGCAGCCAAGCGTGAC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A A C T G A G T C C T A G A C G T C G A T T C G A A G T C A C G T
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C A C G T