Information for 21-AATAGACCTC (Motif 23)

T G C A T C G A A C G T C T G A T C A G T C G A T A G C G A T C G C A T A T G C
Reverse Opposite:
T A C G C G T A C T A G A T C G A G C T A G T C G A C T T G C A A G C T A C G T
p-value:1e-21
log p-value:-5.011e+01
Information Content per bp:1.453
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif7.50%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif1.64%
Average Position of motif in Targets51.1 +/- 26.9bp
Average Position of motif in Background50.6 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AATAGACCTC-
---TGACCYCT
 T G C A T C G A A C G T C T G A T C A G T C G A T A G C G A T C G C A T A T G C A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AATAGACCTC-
---TGACCTYA
 T G C A T C G A A C G T C T G A T C A G T C G A T A G C G A T C G C A T A T G C A C G T
A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AATAGACCTC-----
NNANTTGACCCCTNNNN
 A C G T A C G T T G C A T C G A A C G T C T G A T C A G T C G A T A G C G A T C G C A T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AATAGACCTC
-CNAGGCCT-
 T G C A T C G A A C G T C T G A T C A G T C G A T A G C G A T C G C A T A T G C
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AATAGACCTC------
CATAAGACCACCATTAC
 A C G T T G C A T C G A A C G T C T G A T C A G T C G A T A G C G A T C G C A T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AATAGACCTC-
---AGGCCTAG
 T G C A T C G A A C G T C T G A T C A G T C G A T A G C G A T C G C A T A T G C A C G T
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AATAGACCTC
GGTTAGAGACCT-
 A C G T A C G T A C G T T G C A T C G A A C G T C T G A T C A G T C G A T A G C G A T C G C A T A T G C
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AATAGACCTC
---TGACCT-
 T G C A T C G A A C G T C T G A T C A G T C G A T A G C G A T C G C A T A T G C
A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AATAGACCTC---
---TGACCTTGAT
 T G C A T C G A A C G T C T G A T C A G T C G A T A G C G A T C G C A T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AATAGACCTC---
AGAAATGACTTCCCT
 A C G T A C G T T G C A T C G A A C G T C T G A T C A G T C G A T A G C G A T C G C A T A T G C A C G T A C G T A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T