Information for 20-TTTACTACTC (Motif 22)

A C G T A C G T A C G T C G T A A G T C A C G T C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T C G T A A C T G A C G T C G T A C G T A C G T A
p-value:1e-23
log p-value:-5.377e+01
Information Content per bp:1.530
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif5.69%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif1.12%
Average Position of motif in Targets51.6 +/- 22.8bp
Average Position of motif in Background58.7 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC12/MA0906.1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTTACTACTC
NTTTTACGACC-
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A G T C A C G T A G T C
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TTTACTACTC--
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A G T C A C G T A G T C A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

HOXD12/MA0873.1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TTTACTACTC
NTTTTACGACT-
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A G T C A C G T A G T C
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:4
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TTTACTACTC--
NNNATTTTACGACNNTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A G T C A C G T A G T C A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

PH0065.1_Hoxc10/Jaspar

Match Rank:5
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTTACTACTC--
ANNTTTTACGACNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A G T C A C G T A G T C A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0076.1_Hoxd11/Jaspar

Match Rank:6
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TTTACTACTC--
ANNATTTTACGACNTNA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A G T C A C G T A G T C A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

PH0047.1_Hoxa11/Jaspar

Match Rank:7
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTTACTACTC--
NNGTTTTACGACTTTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A G T C A C G T A G T C A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

PH0066.1_Hoxc11/Jaspar

Match Rank:8
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----TTTACTACTC--
NNNTTTTACGACNTTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A G T C A C G T A G T C A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

HOXD11/MA0908.1/Jaspar

Match Rank:9
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TTTACTACTC
NTTTTACGAC--
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A G T C A C G T A G T C
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:10
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTTACTACTC
NTTTTACGACC-
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A G T C A C G T A G T C
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C A C G T