Motif 17

Information for 15-AGCCCCGCCC (Motif 17)

Reverse Opposite:

p-value:	1e-26
log p-value:	-6.021e+01
Information Content per bp:	1.761
Number of Target Sequences with motif	36.0
Percentage of Target Sequences with motif	4.66%
Number of Background Sequences with motif	1.1
Percentage of Background Sequences with motif	0.44%
Average Position of motif in Targets	41.3 +/- 25.8bp
Average Position of motif in Background	59.2 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)	1.2
Multiplicity (# of sites on avg that occur together)	1.11
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:	1
Score:	0.90
Offset:	0
Orientation:	forward strand
Alignment:	AGCCCCGCCC-- GGCCCCGCCCCC

KLF5/MA0599.1/Jaspar

Match Rank:	2
Score:	0.89
Offset:	1
Orientation:	forward strand
Alignment:	AGCCCCGCCC- -GCCCCGCCCC

POL003.1_GC-box/Jaspar

Match Rank:	3
Score:	0.88
Offset:	-1
Orientation:	reverse strand
Alignment:	-AGCCCCGCCC--- NAGCCCCGCCCCCN

SP1/MA0079.3/Jaspar

Match Rank:	4
Score:	0.87
Offset:	1
Orientation:	forward strand
Alignment:	AGCCCCGCCC-- -GCCCCGCCCCC

SP2/MA0516.1/Jaspar

Match Rank:	5
Score:	0.87
Offset:	1
Orientation:	forward strand
Alignment:	AGCCCCGCCC------ -GCCCCGCCCCCTCCC

Klf4/MA0039.2/Jaspar

Match Rank:	6
Score:	0.86
Offset:	1
Orientation:	reverse strand
Alignment:	AGCCCCGCCC- -GCCCCACCCA

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:	7
Score:	0.85
Offset:	1
Orientation:	reverse strand
Alignment:	AGCCCCGCCC- -GCCMCRCCCH

PB0039.1_Klf7_1/Jaspar

Match Rank:	8
Score:	0.85
Offset:	-2
Orientation:	forward strand
Alignment:	--AGCCCCGCCC---- TCGACCCCGCCCCTAT

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:	9
Score:	0.84
Offset:	-1
Orientation:	forward strand
Alignment:	-AGCCCCGCCC---- NRGCCCCRCCCHBNN

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:	10
Score:	0.83
Offset:	1
Orientation:	reverse strand
Alignment:	AGCCCCGCCC--- -GCTCCGCCCMCY