Information for 9-CACTCTCGCTCGG (Motif 9)

A G T C C G T A A G T C C A G T A G T C C G A T A T G C T A C G A G T C C G A T A T G C T C A G A T C G
Reverse Opposite:
A T G C A G T C T A C G C G T A A C T G A T G C T A C G G C T A A C T G G T C A A C T G G C A T T C A G
p-value:1e-13
log p-value:-3.046e+01
Information Content per bp:1.712
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets45.9 +/- 22.1bp
Average Position of motif in Background47.7 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CACTCTCGCTCGG
ACCACTCTCGGTCAC
 A C G T A C G T A G T C C G T A A G T C C A G T A G T C C G A T A T G C T A C G A G T C C G A T A T G C T C A G A T C G
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CACTCTCGCTCGG
NNAATTCTCGNTNAN
 A C G T A C G T A G T C C G T A A G T C C A G T A G T C C G A T A T G C T A C G A G T C C G A T A T G C T C A G A T C G
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0138.1_Irf4_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CACTCTCGCTCGG
AGTATTCTCGGTTGC
 A C G T A C G T A G T C C G T A A G T C C A G T A G T C C G A T A T G C T A C G A G T C C G A T A T G C T C A G A T C G
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CACTCTCGCTCGG---
-TCNCCTGCTGNGNNN
 A G T C C G T A A G T C C A G T A G T C C G A T A T G C T A C G A G T C C G A T A T G C T C A G A T C G A C G T A C G T A C G T
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CACTCTCGCTCGG---
-TNTCCTGCTGTGNNG
 A G T C C G T A A G T C C A G T A G T C C G A T A T G C T A C G A G T C C G A T A T G C T C A G A T C G A C G T A C G T A C G T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CACTCTCGCTCGG---
-NNTCCTGCTGTGNNN
 A G T C C G T A A G T C C A G T A G T C C G A T A T G C T A C G A G T C C G A T A T G C T C A G A T C G A C G T A C G T A C G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CACTCTCGCTCGG-
----CCTGCTGAGH
 A G T C C G T A A G T C C A G T A G T C C G A T A T G C T A C G A G T C C G A T A T G C T C A G A T C G A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CACTCTCGCTCGG--
NNAGTCCCACTCNNNN
 A C G T A G T C C G T A A G T C C A G T A G T C C G A T A T G C T A C G A G T C C G A T A T G C T C A G A T C G A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.57
Offset:7
Orientation:forward strand
Alignment:CACTCTCGCTCGG
-------GCTCCG
 A G T C C G T A A G T C C A G T A G T C C G A T A T G C T A C G A G T C C G A T A T G C T C A G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CACTCTCGCTCGG
------NGCTN--
 A G T C C G T A A G T C C A G T A G T C C G A T A T G C T A C G A G T C C G A T A T G C T C A G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T