Information for 18-TTTGGCCAGC (Motif 31)

C G A T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A C T G A G T C A G T C C G T A C G T A C G T A
p-value:1e-6
log p-value:-1.435e+01
Information Content per bp:1.966
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.8 +/- 4.3bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTTGGCCAGC
-TTGGCA---
 C G A T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C T G A G T C
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTTGGCCAGC
NTTGGCANN-
 C G A T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C T G A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTTGGCCAGC--
--TGCCCAGNHW
 C G A T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C T G A G T C A C G T A C G T
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTTGGCCAGC
NNTTGGCANN-
 A C G T C G A T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C T G A G T C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTTGGCCAGC
CCGATTGGCT---
 A C G T A C G T A C G T C G A T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C T G A G T C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTGGCCAGC
TGATTGGCTANN
 A C G T A C G T C G A T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C T G A G T C
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TTTGGCCAGC-
------CAGCC
 C G A T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTTGGCCAGC---
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T C G A T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C T G A G T C A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTTGGCCAGC-
-TGAGTCAGCA
 C G A T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C T G A G T C A C G T
A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTTGGCCAGC
-TTGCCAAG-
 C G A T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C T G A G T C
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T