Information for 8-AAATCAGCCT (Motif 17)

C T G A C T G A C G T A A C G T A T G C G T C A A C T G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G T A C G A G T C A C G T A T C G C G T A A C G T A G C T A G C T
p-value:1e-10
log p-value:-2.448e+01
Information Content per bp:1.891
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets46.4 +/- 26.9bp
Average Position of motif in Background51.2 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------AAATCAGCCT-
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G T A A C G T A T G C G T C A A C T G A G T C A G T C A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAATCAGCCT
CAAATCACTG-
 A C G T C T G A C T G A C G T A A C G T A T G C G T C A A C T G A G T C A G T C A C G T
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAATCAGCCT
CCAATCAA---
 A C G T C T G A C T G A C G T A A C G T A T G C G T C A A C T G A G T C A G T C A C G T
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AAATCAGCCT-
---BCAGACWA
 C T G A C T G A C G T A A C G T A T G C G T C A A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Hoxc9/MA0485.1/Jaspar

Match Rank:5
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AAATCAGCCT
GGCCATAAATCAC---
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G T A A C G T A T G C G T C A A C T G A G T C A G T C A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:6
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AAATCAGCCT
GGCCATAAATCA----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G T A A C G T A T G C G T C A A C T G A G T C A G T C A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AAATCAGCCT
GCCATAAATCA----
 A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G T A A C G T A T G C G T C A A C T G A G T C A G T C A C G T
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAATCAGCCT-----
AAGTCAGCANTTTTN
 C T G A C T G A C G T A A C G T A T G C G T C A A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

POU3F3/MA0788.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAATCAGCCT---
AAATTAGCATAAT
 C T G A C T G A C G T A A C G T A T G C G T C A A C T G A G T C A G T C A C G T A C G T A C G T A C G T
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAATCAGCCT---
CTGAGTCAGCAATTT
 A C G T A C G T C T G A C T G A C G T A A C G T A T G C G T C A A C T G A G T C A G T C A C G T A C G T A C G T A C G T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T