Information for 3-AATATGGCGG (Motif 4)

G C T A T C G A C A G T T C G A A C G T C A T G A C T G A T G C A C T G A T C G
Reverse Opposite:
T A G C T G A C T A C G G T A C G T A C T G C A A G C T G T C A A G C T C G A T
p-value:1e-15
log p-value:-3.653e+01
Information Content per bp:1.673
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif5.74%
Number of Background Sequences with motif679.9
Percentage of Background Sequences with motif1.49%
Average Position of motif in Targets52.6 +/- 27.0bp
Average Position of motif in Background52.1 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-AATATGGCGG-
CAAGATGGCGGC
 A C G T G C T A T C G A C A G T T C G A A C G T C A T G A C T G A T G C A C T G A T C G A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-AATATGGCGG-
CAAGATGGCGGC
 A C G T G C T A T C G A C A G T T C G A A C G T C A T G A C T G A T G C A C T G A T C G A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:AATATGGCGG--
-TAATGGCGGNC
 G C T A T C G A C A G T T C G A A C G T C A T G A C T G A T G C A C T G A T C G A C G T A C G T
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AATATGGCGG------
NAGANTGGCGGGGNGNA
 A C G T G C T A T C G A C A G T T C G A A C G T C A T G A C T G A T G C A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

NEUROD2/MA0668.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AATATGGCGG
ACCATATGGC--
 A C G T A C G T G C T A T C G A C A G T T C G A A C G T C A T G A C T G A T G C A C T G A T C G
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T A C G T

Neurog1/MA0623.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AATATGGCGG
ACCATATGGT--
 A C G T A C G T G C T A T C G A C A G T T C G A A C G T C A T G A C T G A T G C A C T G A T C G
C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AATATGGCGG----
--BTKGGCGGGAAA
 G C T A T C G A C A G T T C G A A C G T C A T G A C T G A T G C A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

E2F8/MA0865.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AATATGGCGG----
--TTTGGCGGGAAA
 G C T A T C G A C A G T T C G A A C G T C A T G A C T G A T G C A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A

E2F7/MA0758.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AATATGGCGG-----
-TTTTGGCGGGAAAA
 G C T A T C G A C A G T T C G A A C G T C A T G A C T G A T G C A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AATATGGCGG
---TTGGCA-
 G C T A T C G A C A G T T C G A A C G T C A T G A C T G A T G C A C T G A T C G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T