Information for 18-GGGCTTCCAA (Motif 26)

A C T G A C T G A C T G A G T C C G A T A C G T A G T C A G T C T C G A C G T A
Reverse Opposite:
A C G T A G C T A C T G C T A G C G T A C G T A A C T G A G T C A G T C A G T C
p-value:1e-5
log p-value:-1.380e+01
Information Content per bp:1.880
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif95.3
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets56.7 +/- 21.7bp
Average Position of motif in Background50.9 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------GGGCTTCCAA
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G A T A C G T A G T C A G T C T C G A C G T A
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGGCTTCCAA
NGTGGGCAT----
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G A T A C G T A G T C A G T C T C G A C G T A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGGCTTCCAA
GGGGATTTCC-
 A C G T A C T G A C T G A C T G A G T C C G A T A C G T A G T C A G T C T C G A C G T A
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGGCTTCCAA
GGGGATTTCC-
 A C G T A C T G A C T G A C T G A G T C C G A T A C G T A G T C A G T C T C G A C G T A
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGGCTTCCAA
--GCTTCC--
 A C T G A C T G A C T G A G T C C G A T A C G T A G T C A G T C T C G A C G T A
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGGCTTCCAA
NGGGGATTTCCC
 A C G T A C G T A C T G A C T G A C T G A G T C C G A T A C G T A G T C A G T C T C G A C G T A
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGGCTTCCAA
GGGAATTTCC-
 A C G T A C T G A C T G A C T G A G T C C G A T A C G T A G T C A G T C T C G A C G T A
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GGGCTTCCAA
NRRGGGTCTT----
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G A T A C G T A G T C A G T C T C G A C G T A
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGGCTTCCAA
TNNGGGCAG----
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G A T A C G T A G T C A G T C T C G A C G T A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGGCTTCCAA-
GGGGATTCCCCC
 A C G T A C T G A C T G A C T G A G T C C G A T A C G T A G T C A G T C T C G A C G T A A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C