Information for 15-ACTAGAGGGC (Motif 22)

C T G A T A G C G C A T C T G A T A C G T C G A T C A G T A C G A T C G T A G C
Reverse Opposite:
A T C G T A G C A T G C A G T C A G C T A G T C G A C T C G T A A T C G A G C T
p-value:1e-8
log p-value:-2.003e+01
Information Content per bp:1.445
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.19%
Number of Background Sequences with motif393.6
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets53.5 +/- 27.1bp
Average Position of motif in Background50.4 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----ACTAGAGGGC-----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T C T G A T A G C G C A T C T G A T A C G T C G A T C A G T A C G A T C G T A G C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----ACTAGAGGGC----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T C T G A T A G C G C A T C T G A T A C G T C G A T C A G T A C G A T C G T A G C A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ACTAGAGGGC-------
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T C T G A T A G C G C A T C T G A T A C G T C G A T C A G T A C G A T C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACTAGAGGGC--
TCACCTCTGGGCAG
 A C G T A C G T C T G A T A G C G C A T C T G A T A C G T C G A T C A G T A C G A T C G T A G C A C G T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACTAGAGGGC------
NNNAAGGGGGCGGGNNN
 A C G T C T G A T A G C G C A T C T G A T A C G T C G A T C A G T A C G A T C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACTAGAGGGC-
-BTBRAGTGSN
 C T G A T A G C G C A T C T G A T A C G T C G A T C A G T A C G A T C G T A G C A C G T
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACTAGAGGGC--
-CTTGAGTGGCT
 C T G A T A G C G C A T C T G A T A C G T C G A T C A G T A C G A T C G T A G C A C G T A C G T
A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----ACTAGAGGGC-
GGGTTACTANAGGTCA
 A C G T A C G T A C G T A C G T A C G T C T G A T A G C G C A T C T G A T A C G T C G A T C A G T A C G A T C G T A G C A C G T
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ACTAGAGGGC--
---TNNGGGCAG
 C T G A T A G C G C A T C T G A T A C G T C G A T C A G T A C G A T C G T A G C A C G T A C G T
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ACTAGAGGGC--
--TTGAGTGSTT
 C T G A T A G C G C A T C T G A T A C G T C G A T C A G T A C G A T C G T A G C A C G T A C G T
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T