Information for 13-CTCACGGCCAAGC (Motif 20)

A G T C A C G T A G T C C T G A A T G C A C T G A C T G A G T C A G T C C G T A C T G A A C T G A G T C
Reverse Opposite:
A C T G G T A C A G C T A C G T A C T G A C T G A G T C A G T C A T C G A G C T A C T G C G T A A C T G
p-value:1e-9
log p-value:-2.079e+01
Information Content per bp:1.938
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.8 +/- 25.4bp
Average Position of motif in Background29.2 +/- 4.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTCACGGCCAAGC---
-TCCCAGMCRAGCCCC
 A G T C A C G T A G T C C T G A A T G C A C T G A C T G A G T C A G T C C G T A C T G A A C T G A G T C A C G T A C G T A C G T
A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTCACGGCCAAGC
NTCAAGGTCA---
 A G T C A C G T A G T C C T G A A T G C A C T G A C T G A G T C A G T C C G T A C T G A A C T G A G T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTCACGGCCAAGC
BTCAAGGTCA---
 A G T C A C G T A G T C C T G A A T G C A C T G A C T G A G T C A G T C C G T A C T G A A C T G A G T C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CTCACGGCCAAGC
-----TGCCAA--
 A G T C A C G T A G T C C T G A A T G C A C T G A C T G A G T C A G T C C G T A C T G A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTCACGGCCAAGC
AAGTTCAAGGTCAGC-
 A C G T A C G T A C G T A G T C A C G T A G T C C T G A A T G C A C T G A C T G A G T C A G T C C G T A C T G A A C T G A G T C
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTCACGGCCAAGC
--CAAGGHCANV-
 A G T C A C G T A G T C C T G A A T G C A C T G A C T G A G T C A G T C C G T A C T G A A C T G A G T C
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

EGR2/MA0472.2/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTCACGGCCAAGC-
---ACGCCCACGCA
 A G T C A C G T A G T C C T G A A T G C A C T G A C T G A G T C A G T C C G T A C T G A A C T G A G T C A C G T
A C G T A C G T A C G T G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTCACGGCCAAGC
---CGTGCCAAG-
 A G T C A C G T A G T C C T G A A T G C A C T G A C T G A G T C A G T C C G T A C T G A A C T G A G T C
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTCACGGCCAAGC
ACCACTCTCGGTCAC--
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C C T G A A T G C A C T G A C T G A G T C A G T C C G T A C T G A A C T G A G T C
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTCACGGCCAAGC-
--ACTAGCCAATCA
 A G T C A C G T A G T C C T G A A T G C A C T G A C T G A G T C A G T C C G T A C T G A A C T G A G T C A C G T
A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A