Information for 6-ACGGCAACCGGGCCGC (Motif 13)

G T C A G T A C A C T G A C T G A T G C C G T A C G T A A G T C A G T C A C T G A T C G A C T G A G T C A G T C A C T G G T A C
Reverse Opposite:
A C T G A G T C A C T G A C T G A G T C A T G C A G T C C T A G A C T G A C G T A C G T A T C G A G T C A G T C A C T G A C G T
p-value:1e-10
log p-value:-2.424e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.8 +/- 11.9bp
Average Position of motif in Background33.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.52
Offset:6
Orientation:forward strand
Alignment:ACGGCAACCGGGCCGC
------AGCGCGCC--
 G T C A G T A C A C T G A C T G A T G C C G T A C G T A A G T C A G T C A C T G A T C G A C T G A G T C A G T C A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:2
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----ACGGCAACCGGGCCGC
GAGAACCGAAACTG------
 A C G T A C G T A C G T A C G T G T C A G T A C A C T G A C T G A T G C C G T A C G T A A G T C A G T C A C T G A T C G A C T G A G T C A G T C A C T G G T A C
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:ACGGCAACCGGGCCGC
-------CTAGGCCT-
 G T C A G T A C A C T G A C T G A T G C C G T A C G T A A G T C A G T C A C T G A T C G A C T G A G T C A G T C A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.50
Offset:4
Orientation:forward strand
Alignment:ACGGCAACCGGGCCGC
----CAAGATGGCGGC
 G T C A G T A C A C T G A C T G A T G C C G T A C G T A A G T C A G T C A C T G A T C G A C T G A G T C A G T C A C T G G T A C
A C G T A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--ACGGCAACCGGGCCGC
SCCTAGCAACAG------
 A C G T A C G T G T C A G T A C A C T G A C T G A T G C C G T A C G T A A G T C A G T C A C T G A T C G A C T G A G T C A G T C A C T G G T A C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.49
Offset:4
Orientation:forward strand
Alignment:ACGGCAACCGGGCCGC
----CAAGATGGCGGC
 G T C A G T A C A C T G A C T G A T G C C G T A C G T A A G T C A G T C A C T G A T C G A C T G A G T C A G T C A C T G G T A C
A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:7
Score:0.49
Offset:-6
Orientation:reverse strand
Alignment:------ACGGCAACCGGGCCGC
GTTGCCATGGCAACCG------
 A C G T A C G T A C G T A C G T A C G T A C G T G T C A G T A C A C T G A C T G A T G C C G T A C G T A A G T C A G T C A C T G A T C G A C T G A G T C A G T C A C T G G T A C
C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.48
Offset:-5
Orientation:reverse strand
Alignment:-----ACGGCAACCGGGCCGC
TTGCCATGGCAACC-------
 A C G T A C G T A C G T A C G T A C G T G T C A G T A C A C T G A C T G A T G C C G T A C G T A A G T C A G T C A C T G A T C G A C T G A G T C A G T C A C T G G T A C
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.48
Offset:-5
Orientation:reverse strand
Alignment:-----ACGGCAACCGGGCCGC
TTGCCATGGCAACN-------
 A C G T A C G T A C G T A C G T A C G T G T C A G T A C A C T G A C T G A T G C C G T A C G T A A G T C A G T C A C T G A T C G A C T G A G T C A G T C A C T G G T A C
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:10
Score:0.47
Offset:4
Orientation:forward strand
Alignment:ACGGCAACCGGGCCGC
----AAACCGGTTT--
 G T C A G T A C A C T G A C T G A T G C C G T A C G T A A G T C A G T C A C T G A T C G A C T G A G T C A G T C A C T G G T A C
A C G T A C G T A C G T A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T A C G T A C G T