Information for 2-GTMRGCMRCAGAGGGC (Motif 5)

A T C G A G C T G T A C C T A G T C A G A G T C G T C A C T A G A T G C G T C A A C T G C T G A T A C G C T A G C A T G A G T C
Reverse Opposite:
A C T G G A T C A G T C A G T C G A C T A G T C A C G T A T C G A G T C A C G T A C T G A G T C A G T C A C T G T C G A A T G C
p-value:1e-14
log p-value:-3.311e+01
Information Content per bp:1.714
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.8 +/- 25.8bp
Average Position of motif in Background25.3 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GTMRGCMRCAGAGGGC-------
---GCCASCAGGGGGCGCYVNNG
 A T C G A G C T G T A C C T A G T C A G A G T C G T C A C T A G A T G C G T C A A C T G C T G A T A C G C T A G C A T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTMRGCMRCAGAGGGC----
-TGGCCACCAGGGGGCGCTA
 A T C G A G C T G T A C C T A G T C A G A G T C G T C A C T A G A T G C G T C A A C T G C T G A T A C G C T A G C A T G A G T C A C G T A C G T A C G T A C G T
A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTMRGCMRCAGAGGGC-----
-TGGCCACCAGGTGGCACTNT
 A T C G A G C T G T A C C T A G T C A G A G T C G T C A C T A G A T G C G T C A A C T G C T G A T A C G C T A G C A T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTMRGCMRCAGAGGGC-
---CACAGCGGGGGGTC
 A T C G A G C T G T A C C T A G T C A G A G T C G T C A C T A G A T G C G T C A A C T G C T G A T A C G C T A G C A T G A G T C A C G T
A C G T A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTMRGCMRCAGAGGGC-
--NCNCAGCGGGGGGTC
 A T C G A G C T G T A C C T A G T C A G A G T C G T C A C T A G A T G C G T C A A C T G C T G A T A C G C T A G C A T G A G T C A C G T
A C G T A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTMRGCMRCAGAGGGC-
--NCGCAGCGGGGGGTC
 A T C G A G C T G T A C C T A G T C A G A G T C G T C A C T A G A T G C G T C A A C T G C T G A T A C G C T A G C A T G A G T C A C G T
A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GTMRGCMRCAGAGGGC-
--DCHCAGCAGGRGGCC
 A T C G A G C T G T A C C T A G T C A G A G T C G T C A C T A G A T G C G T C A A C T G C T G A T A C G C T A G C A T G A G T C A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GTMRGCMRCAGAGGGC
------AACAGATGGC
 A T C G A G C T G T A C C T A G T C A G A G T C G T C A C T A G A T G C G T C A A C T G C T G A T A C G C T A G C A T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GTMRGCMRCAGAGGGC------
-----NNNAAGGGGGCGGGNNN
 A T C G A G C T G T A C C T A G T C A G A G T C G T C A C T A G A T G C G T C A A C T G C T G A T A C G C T A G C A T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GTMRGCMRCAGAGGGC
---GACAGCTGCAG--
 A T C G A G C T G T A C C T A G T C A G A G T C G T C A C T A G A T G C G T C A A C T G C T G A T A C G C T A G C A T G A G T C
A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T