Information for 13-GGTTTTTGCCAAA (Motif 17)

C A T G A C T G G A C T G A C T A C G T A G C T A C G T A T C G T G A C T G A C G T C A T G C A G C T A
Reverse Opposite:
C A G T A C G T C A G T A C T G A C T G T A G C G T C A C T G A G T C A C T G A C G T A G T A C G T A C
p-value:1e-6
log p-value:-1.391e+01
Information Content per bp:1.660
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif109.2
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets57.4 +/- 16.5bp
Average Position of motif in Background47.7 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GGTTTTTGCCAAA-
----GGTGCCAAGT
 C A T G A C T G G A C T G A C T A C G T A G C T A C G T A T C G T G A C T G A C G T C A T G C A G C T A A C G T
A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:GGTTTTTGCCAAA
------TGCCAA-
 C A T G A C T G G A C T G A C T A C G T A G C T A C G T A T C G T G A C T G A C G T C A T G C A G C T A
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGTTTTTGCCAAA
----CGTGCCAAG
 C A T G A C T G G A C T G A C T A C G T A G C T A C G T A T C G T G A C T G A C G T C A T G C A G C T A
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGTTTTTGCCAAA-
ANATTTTTGCAANTN
 A C G T C A T G A C T G G A C T G A C T A C G T A G C T A C G T A T C G T G A C T G A C G T C A T G C A G C T A A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GGTTTTTGCCAAA
-----TTGCCAAG
 C A T G A C T G G A C T G A C T A C G T A G C T A C G T A T C G T G A C T G A C G T C A T G C A G C T A
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

E2F8/MA0865.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGTTTTTGCCAAA
-TTTCCCGCCAAA
 C A T G A C T G G A C T G A C T A C G T A G C T A C G T A T C G T G A C T G A C G T C A T G C A G C T A
A C G T G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A

E2F7/MA0758.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGTTTTTGCCAAA-
TTTTCCCGCCAAAA
 C A T G A C T G G A C T G A C T A C G T A G C T A C G T A T C G T G A C T G A C G T C A T G C A G C T A A C G T
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGTTTTTGCCAAA
GGGGATTTCC----
 A C G T C A T G A C T G G A C T G A C T A C G T A G C T A C G T A T C G T G A C T G A C G T C A T G C A G C T A
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GGTTTTTGCCAAA-
-----ATGCCAACC
 C A T G A C T G G A C T G A C T A C G T A G C T A C G T A T C G T G A C T G A C G T C A T G C A G C T A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GGTTTTTGCCAAA
----TTTTCCA--
 C A T G A C T G G A C T G A C T A C G T A G C T A C G T A T C G T G A C T G A C G T C A T G C A G C T A
A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T