Information for 11-GAGGGCWTCKGAG (Motif 15)

A C T G C G T A A C T G A C T G A T C G A G T C C G A T A C G T A T G C A C G T A C T G C T G A A C T G
Reverse Opposite:
A G T C A G C T A G T C G T C A A T C G C G T A G C T A A C T G A T G C A G T C A G T C A C G T A G T C
p-value:1e-8
log p-value:-1.922e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.9 +/- 27.0bp
Average Position of motif in Background48.5 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAGGGCWTCKGAG
NGTGGGCAT-----
 A C G T A C T G C G T A A C T G A C T G A T C G A G T C C G A T A C G T A T G C A C G T A C T G C T G A A C T G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAGGGCWTCKGAG----
--GGTCANYTGAGGWCA
 A C T G C G T A A C T G A C T G A T C G A G T C C G A T A C G T A T G C A C G T A C T G C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

PLAG1/MA0163.1/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GAGGGCWTCKGAG-
GGGGCCCAAGGGGG
 A C T G C G T A A C T G A C T G A T C G A G T C C G A T A C G T A T G C A C G T A C T G C T G A A C T G A C G T
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GAGGGCWTCKGAG
TRAGGTCA------
 A C G T A C T G C G T A A C T G A C T G A T C G A G T C C G A T A C G T A T G C A C G T A C T G C T G A A C T G
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GAGGGCWTCKGAG
TNNGGGCAG-----
 A C G T A C T G C G T A A C T G A C T G A T C G A G T C C G A T A C G T A T G C A C G T A C T G C T G A A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GAGGGCWTCKGAG
CTTGAGTGGCT-----
 A C G T A C G T A C G T A C T G C G T A A C T G A C T G A T C G A G T C C G A T A C G T A T G C A C G T A C T G C T G A A C T G
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGCWTCKGAG
TTGAGTGSTT-----
 A C G T A C G T A C T G C G T A A C T G A C T G A T C G A G T C C G A T A C G T A T G C A C G T A C T G C T G A A C T G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GAGGGCWTCKGAG
CAAAGGTCAAGGG--
 A C G T A C G T A C T G C G T A A C T G A C T G A T C G A G T C C G A T A C G T A T G C A C G T A C T G C T G A A C T G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GAGGGCWTCKGAG
----GCTTCC---
 A C T G C G T A A C T G A C T G A T C G A G T C C G A T A C G T A T G C A C G T A C T G C T G A A C T G
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GAGGGCWTCKGAG
-AGGGTAACAGC-
 A C T G C G T A A C T G A C T G A T C G A G T C C G A T A C G T A T G C A C G T A C T G C T G A A C T G
A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T