Information for 1-VAAACCACAWVMW (Motif 1)

T A G C G C T A T G C A T C G A A G T C A G T C C G T A A G T C G C T A C G T A T G A C G T A C G C A T
Reverse Opposite:
C G T A C A T G A C T G G C A T C G A T A C T G G C A T A C T G A C T G A G C T A C G T C G A T A T C G
p-value:1e-189
log p-value:-4.354e+02
Information Content per bp:1.614
Number of Target Sequences with motif283.0
Percentage of Target Sequences with motif36.56%
Number of Background Sequences with motif1777.9
Percentage of Background Sequences with motif3.86%
Average Position of motif in Targets51.4 +/- 23.4bp
Average Position of motif in Background50.4 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.97
Offset:1
Orientation:forward strand
Alignment:VAAACCACAWVMW
-AAACCACANN--
 T A G C G C T A T G C A T C G A A G T C A G T C C G T A A G T C G C T A C G T A T G A C G T A C G C A T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:forward strand
Alignment:VAAACCACAWVMW
NWAACCACADNN-
 T A G C G C T A T G C A T C G A A G T C A G T C C G T A A G T C G C T A C G T A T G A C G T A C G C A T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.95
Offset:0
Orientation:forward strand
Alignment:VAAACCACAWVMW
NAAACCACAG---
 T A G C G C T A T G C A T C G A A G T C A G T C C G T A A G T C G C T A C G T A T G A C G T A C G C A T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:VAAACCACAWVMW
-AAACCACAGAN-
 T A G C G C T A T G C A T C G A A G T C A G T C C G T A A G T C G C T A C G T A T G A C G T A C G C A T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:VAAACCACAWVMW
-AAACCACAGC--
 T A G C G C T A T G C A T C G A A G T C A G T C C G T A A G T C G C T A C G T A T G A C G T A C G C A T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.88
Offset:1
Orientation:forward strand
Alignment:VAAACCACAWVMW
-AAACCGCAAA--
 T A G C G C T A T G C A T C G A A G T C A G T C C G T A A G T C G C T A C G T A T G A C G T A C G C A T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.87
Offset:1
Orientation:forward strand
Alignment:VAAACCACAWVMW
-AAACCGCAA---
 T A G C G C T A T G C A T C G A A G T C A G T C C G T A A G T C G C T A C G T A T G A C G T A C G C A T
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.76
Offset:2
Orientation:forward strand
Alignment:VAAACCACAWVMW
--ATCCAC-----
 T A G C G C T A T G C A T C G A A G T C A G T C C G T A A G T C G C T A C G T A T G A C G T A C G C A T
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:VAAACCACAWVMW--
---ACCACATCCTGT
 T A G C G C T A T G C A T C G A A G T C A G T C C G T A A G T C G C T A C G T A T G A C G T A C G C A T A C G T A C G T
A C G T A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--VAAACCACAWVMW
TCCAATCCACA----
 A C G T A C G T T A G C G C T A T G C A T C G A A G T C A G T C C G T A A G T C G C T A C G T A T G A C G T A C G C A T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T