Information for 13-CTCCGTAGCCGCT (Motif 19)

A G T C A C G T A G T C A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T C G A G T C A C G T
Reverse Opposite:
C G T A A C T G A T G C A C T G A C T G A G T C A C G T T C G A A G T C A C T G A C T G C G T A A C T G
p-value:1e-7
log p-value:-1.646e+01
Information Content per bp:1.928
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.5 +/- 23.8bp
Average Position of motif in Background28.9 +/- 3.7bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTCCGTAGCCGCT
GCTCCG--------
 A C G T A G T C A C G T A G T C A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T C G A G T C A C G T
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTCCGTAGCCGCT
---CGCAGCTGCG
 A G T C A C G T A G T C A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T C G A G T C A C G T
A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTCCGTAGCCGCT----
CTCAGCAGCTGCTACTG
 A G T C A C G T A G T C A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTCCGTAGCCGCT
CTGCGCATGCGC-
 A G T C A C G T A G T C A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T C G A G T C A C G T
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CTCCGTAGCCGCT
-----CAGCC---
 A G T C A C G T A G T C A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTCCGTAGCCGCT
-TGCGCAGGCGC-
 A G T C A C G T A G T C A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T C G A G T C A C G T
A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CTCCGTAGCCGCT
---AGCAGCTGCT
 A G T C A C G T A G T C A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T C G A G T C A C G T
A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

NRF(NRF)/Promoter/Homer

Match Rank:8
Score:0.48
Offset:0
Orientation:forward strand
Alignment:CTCCGTAGCCGCT
GTGCGCATGCGC-
 A G T C A C G T A G T C A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T C G A G T C A C G T
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CTCCGTAGCCGCT---
----NNAGCAGCTGCT
 A G T C A C G T A G T C A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-CTCCGTAGCCGCT
CCCCCGCCCCCGCC
 A C G T A G T C A C G T A G T C A G T C A C T G A C G T C G T A A C T G A G T C A G T C A T C G A G T C A C G T
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C