p-value: | 1e-8 |
log p-value: | -1.996e+01 |
Information Content per bp: | 1.807 |
Number of Target Sequences with motif | 7.0 |
Percentage of Target Sequences with motif | 0.83% |
Number of Background Sequences with motif | 11.8 |
Percentage of Background Sequences with motif | 0.03% |
Average Position of motif in Targets | 48.6 +/- 22.4bp |
Average Position of motif in Background | 40.2 +/- 41.1bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 1.14 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx1/MA0509.1/Jaspar
Match Rank: | 1 |
Score: | 0.66 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GCTGTTGCCGCGG---- ---GTTGCCATGGNAAC |
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Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 2 |
Score: | 0.66 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCTGTTGCCGCGG--- --NGTTGCCATGGCAA |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 3 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCTGTTGCCGCGG -CTGTTGCTAGGS |
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RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
Match Rank: | 4 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCTGTTGCCGCGG---- -CGGTTGCCATGGCAAC |
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X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCTGTTGCCGCGG--- --GGTTGCCATGGCAA |
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Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
Match Rank: | 6 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCTGTTGCCGCGG---- --KGTTGCCATGGCAAC |
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Spz1/MA0111.1/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCTGTTGCCGCGG GCTGTTACCCT-- |
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PB0055.1_Rfx4_1/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCTGTTGCCGCGG-- NNCGTTGCTATGGNN |
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PB0117.1_Eomes_2/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GCTGTTGCCGCGG GCGGAGGTGTCGCCTC-- |
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PB0054.1_Rfx3_1/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GCTGTTGCCGCGG------ NTNNNNNGTTGCTANGGNNCANA |
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