Information for 7-CAKCMACMCTKASCCM (Motif 9)

A G T C C G T A A C T G A T G C G T A C G T C A A G T C G T A C A G T C A C G T A C G T G T C A T A C G A G T C A G T C G T C A
Reverse Opposite:
A C G T A C T G A C T G A T G C A C G T T G A C C G T A A C T G A C T G A C T G A C G T A C T G A T C G G T A C A C G T A C T G
p-value:1e-10
log p-value:-2.446e+01
Information Content per bp:1.823
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.6 +/- 26.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAKCMACMCTKASCCM
TCAGNGAGCGTGAC---
 A C G T A G T C C G T A A C T G A T G C G T A C G T C A A G T C G T A C A G T C A C G T A C G T G T C A T A C G A G T C A G T C G T C A
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:2
Score:0.50
Offset:8
Orientation:forward strand
Alignment:CAKCMACMCTKASCCM
--------ATAATCCC
 A G T C C G T A A C T G A T G C G T A C G T C A A G T C G T A C A G T C A C G T A C G T G T C A T A C G A G T C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

PH0004.1_Nkx3-2/Jaspar

Match Rank:3
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CAKCMACMCTKASCCM-
CATAACCACTTAACAAC
 A G T C C G T A A C T G A T G C G T A C G T C A A G T C G T A C A G T C A C G T A C G T G T C A T A C G A G T C A G T C G T C A A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

GLI2/MA0734.1/Jaspar

Match Rank:4
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CAKCMACMCTKASCCM
GCGACCACACTG-----
 A C G T A G T C C G T A A C T G A T G C G T A C G T C A A G T C G T A C A G T C A C G T A C G T G T C A T A C G A G T C A G T C G T C A
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G A C G T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:5
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CAKCMACMCTKASCCM
----ACCACTTAA---
 A G T C C G T A A C T G A T G C G T A C G T C A A G T C G T A C A G T C A C G T A C G T G T C A T A C G A G T C A G T C G T C A
A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CAKCMACMCTKASCCM-----
-----NNNNTGACCCGGCGCG
 A G T C C G T A A C T G A T G C G T A C G T C A A G T C G T A C A G T C A C G T A C G T G T C A T A C G A G T C A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CAKCMACMCTKASCCM
----ACCACTTAA---
 A G T C C G T A A C T G A T G C G T A C G T C A A G T C G T A C A G T C A C G T A C G T G T C A T A C G A G T C A G T C G T C A
A C G T A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CAKCMACMCTKASCCM
-ATCCAC---------
 A G T C C G T A A C T G A T G C G T A C G T C A A G T C G T A C A G T C A C G T A C G T G T C A T A C G A G T C A G T C G T C A
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:9
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CAKCMACMCTKASCCM-----
-----NNCNTGACCCCGCTCT
 A G T C C G T A A C T G A T G C G T A C G T C A A G T C G T A C A G T C A C G T A C G T G T C A T A C G A G T C A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CAKCMACMCTKASCCM
CRCCCACGCA------
 A G T C C G T A A C T G A T G C G T A C G T C A A G T C G T A C A G T C A C G T A C G T G T C A T A C G A G T C A G T C G T C A
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T