Information for 5-TTGASTGGATRGTACT (Motif 7)

A C G T C G A T A C T G C G T A A T C G A C G T C T A G A C T G G T C A A G C T C T A G A T C G A G C T C G T A A G T C C A G T
Reverse Opposite:
G C T A C T A G A C G T C T G A A T G C G A C T C T G A A C G T G T A C A G T C C G T A T A C G A C G T A G T C C G T A C G T A
p-value:1e-10
log p-value:-2.446e+01
Information Content per bp:1.771
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.3 +/- 27.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0026.1_Duxbl/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTGASTGGATRGTACT
NNNNGTTGATTGGGTCG----
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A T C G A C G T C T A G A C T G G T C A A G C T C T A G A T C G A G C T C G T A A G T C C A G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTGASTGGATRGTACT
CTTGAGTGGCT------
 A C G T A C G T C G A T A C T G C G T A A T C G A C G T C T A G A C T G G T C A A G C T C T A G A T C G A G C T C G T A A G T C C A G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTGASTGGATRGTACT
TTGATTGN--------
 A C G T C G A T A C T G C G T A A T C G A C G T C T A G A C T G G T C A A G C T C T A G A T C G A G C T C G T A A G T C C A G T
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTGASTGGATRGTACT
-TGATTGGCTANN---
 A C G T C G A T A C T G C G T A A T C G A C G T C T A G A C T G G T C A A G C T C T A G A T C G A G C T C G T A A G T C C A G T
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTGASTGGATRGTACT
TTRAGTGSYK------
 A C G T C G A T A C T G C G T A A T C G A C G T C T A G A C T G G T C A A G C T C T A G A T C G A G C T C G T A A G T C C A G T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTGASTGGATRGTACT
BTBRAGTGSN-------
 A C G T A C G T C G A T A C T G C G T A A T C G A C G T C T A G A C T G G T C A A G C T C T A G A T C G A G C T C G T A A G T C C A G T
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTGASTGGATRGTACT
TTGAGTGSTT------
 A C G T C G A T A C T G C G T A A T C G A C G T C T A G A C T G G T C A A G C T C T A G A T C G A G C T C G T A A G T C C A G T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TTGASTGGATRGTACT
ACTATGAATGAATGAT---
 A C G T A C G T A C G T A C G T C G A T A C T G C G T A A T C G A C G T C T A G A C T G G T C A A G C T C T A G A T C G A G C T C G T A A G T C C A G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTGASTGGATRGTACT
NTNNTTAAGTGGNTNAN---
 A C G T A C G T A C G T A C G T A C G T C G A T A C T G C G T A A T C G A C G T C T A G A C T G G T C A A G C T C T A G A T C G A G C T C G T A A G T C C A G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTGASTGGATRGTACT
CTYRAGTGSY-------
 A C G T A C G T C G A T A C T G C G T A A T C G A C G T C T A G A C T G G T C A A G C T C T A G A T C G A G C T C G T A A G T C C A G T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T