Information for 3-TCCGGCMCCTCCC (Motif 5)

A G C T A G T C A G T C A T C G A T C G A G T C G T C A A G T C A G T C A C G T A T G C A G T C A G T C
Reverse Opposite:
A C T G A C T G T A C G C G T A A C T G A C T G A C G T A C T G A T G C A T G C A C T G A C T G C T G A
p-value:1e-10
log p-value:-2.447e+01
Information Content per bp:1.866
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif5.08%
Number of Background Sequences with motif151.4
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets53.4 +/- 25.2bp
Average Position of motif in Background49.1 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TCCGGCMCCTCCC-
GCCCCGCCCCCTCCC
 A C G T A G C T A G T C A G T C A T C G A T C G A G T C G T C A A G T C A G T C A C G T A T G C A G T C A G T C A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TCCGGCMCCTCCC-
--SNGCACCTGCHS
 A G C T A G T C A G T C A T C G A T C G A G T C G T C A A G T C A G T C A C G T A T G C A G T C A G T C A C G T
A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

KLF5/MA0599.1/Jaspar

Match Rank:3
Score:0.68
Offset:4
Orientation:forward strand
Alignment:TCCGGCMCCTCCC-
----GCCCCGCCCC
 A G C T A G T C A G T C A T C G A T C G A G T C G T C A A G T C A G T C A C G T A T G C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

HES7/MA0822.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TCCGGCMCCTCCC-
--TGGCACGTGCCA
 A G C T A G T C A G T C A T C G A T C G A G T C G T C A A G T C A G T C A C G T A T G C A G T C A G T C A C G T
A C G T A C G T G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:TCCGGCMCCTCCC
-----CCCCCCCC
 A G C T A G T C A G T C A T C G A T C G A G T C G T C A A G T C A G T C A C G T A T G C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TCCGGCMCCTCCC---
--NAGCCCCGCCCCCN
 A G C T A G T C A G T C A T C G A T C G A G T C G T C A A G T C A G T C A C G T A T G C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCCGGCMCCTCCC-
ATCCCCGCCCCTAAAA
 A C G T A C G T A G C T A G T C A G T C A T C G A T C G A G T C G T C A A G T C A G T C A C G T A T G C A G T C A G T C A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

HES5/MA0821.1/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TCCGGCMCCTCCC-
--CGGCACGTGCCA
 A G C T A G T C A G T C A T C G A T C G A G T C G T C A A G T C A G T C A C G T A T G C A G T C A G T C A C G T
A C G T A C G T G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TCCGGCMCCTCCC--
----GCCCCGCCCCC
 A G C T A G T C A G T C A T C G A T C G A G T C G T C A A G T C A G T C A C G T A T G C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TCCGGCMCCTCCC-
TCACCCCGCCCCAAATT
 A C G T A C G T A C G T A G C T A G T C A G T C A T C G A T C G A G T C G T C A A G T C A G T C A C G T A T G C A G T C A G T C A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T