p-value: | 1e-4 |
log p-value: | -1.133e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 2.0 |
Percentage of Target Sequences with motif | 0.85% |
Number of Background Sequences with motif | 1.4 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 48.7 +/- 24.2bp |
Average Position of motif in Background | 66.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.50 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 1 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CGTGCACTCAGCC -AGCCACTCAAG- |
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PB0104.1_Zscan4_1/Jaspar
Match Rank: | 2 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CGTGCACTCAGCC TACATGTGCACATAAAA |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 3 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CGTGCACTCAGCC -AASCACTCAA-- |
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Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
Match Rank: | 4 |
Score: | 0.57 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CGTGCACTCAGCC -AAGCACTTAA-- |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CGTGCACTCAGCC -MRSCACTYAA-- |
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HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer
Match Rank: | 6 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CGTGCACTCAGCC RTACGTGC-------- |
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ISL2/MA0914.1/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CGTGCACTCAGCC ---GCACTTAA-- |
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ARNT::HIF1A/MA0259.1/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CGTGCACTCAGCC GGACGTGC-------- |
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Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
Match Rank: | 9 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CGTGCACTCAGCC --NSCACTYVAV- |
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ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CGTGCACTCAGCC--- GAGCCTGGTACTGWGCCTGR |
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