Information for 6-GCCTGTCATG (Motif 16)

A C T G A T G C A G T C A C G T A T C G A C G T A G T C T C G A G C A T A C T G
Reverse Opposite:
A G T C C G T A A G C T A C T G C G T A A T G C C G T A A C T G A T C G A G T C
p-value:1e-7
log p-value:-1.673e+01
Information Content per bp:1.865
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.39%
Number of Background Sequences with motif101.9
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets45.9 +/- 26.7bp
Average Position of motif in Background52.1 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GCCTGTCATG
-GCTGTCAA-
 A C T G A T G C A G T C A C G T A T C G A C G T A G T C T C G A G C A T A C T G
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GCCTGTCATG
-CCTGTCAA-
 A C T G A T G C A G T C A C G T A T C G A C G T A G T C T C G A G C A T A C T G
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GCCTGTCATG
--NTGTCAN-
 A C T G A T G C A G T C A C G T A T C G A C G T A G T C T C G A G C A T A C T G
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:4
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----GCCTGTCATG--
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C A C G T A T C G A C G T A G T C T C G A G C A T A C T G A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCCTGTCATG
VGCTGWCAVB
 A C T G A T G C A G T C A C G T A T C G A C G T A G T C T C G A G C A T A C T G
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PH0105.1_Meis3/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GCCTGTCATG--
AATTACCTGTCAATAC
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C A C G T A T C G A C G T A G T C T C G A G C A T A C T G A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCCTGTCATG--
GSCTGTCACTCA
 A C T G A T G C A G T C A C G T A T C G A C G T A G T C T C G A G C A T A C T G A C G T A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GCCTGTCATG-
---AGTCACGC
 A C T G A T G C A G T C A C G T A T C G A C G T A G T C T C G A G C A T A C T G A C G T
A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

PH0104.1_Meis2/Jaspar

Match Rank:9
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCCTGTCATG--
AAAGACCTGTCAATAC
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C A C G T A T C G A C G T A G T C T C G A G C A T A C T G A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GCCTGTCATG
--YTGWCADY
 A C T G A T G C A G T C A C G T A T C G A C G T A G T C T C G A G C A T A C T G
A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C