Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 883)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 46100)	% of Background Sequences with Motif
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-89	-2.057e+02	0.0000	94.0	10.65%	230.5	0.50%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-69	-1.610e+02	0.0000	195.0	22.08%	2236.7	4.86%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-67	-1.546e+02	0.0000	215.0	24.35%	2838.2	6.17%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-65	-1.512e+02	0.0000	224.0	25.37%	3138.2	6.82%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-65	-1.508e+02	0.0000	100.0	11.33%	506.9	1.10%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-59	-1.368e+02	0.0000	228.0	25.82%	3526.0	7.66%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-58	-1.357e+02	0.0000	167.0	18.91%	1924.0	4.18%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-58	-1.345e+02	0.0000	172.0	19.48%	2061.1	4.48%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-45	-1.039e+02	0.0000	172.0	19.48%	2587.5	5.62%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-40	-9.353e+01	0.0000	130.0	14.72%	1661.2	3.61%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-39	-8.999e+01	0.0000	108.0	12.23%	1190.5	2.59%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e-38	-8.938e+01	0.0000	111.0	12.57%	1267.0	2.75%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-38	-8.755e+01	0.0000	131.0	14.84%	1788.6	3.89%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-36	-8.478e+01	0.0000	107.0	12.12%	1240.9	2.70%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-34	-7.969e+01	0.0000	114.0	12.91%	1489.1	3.24%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-31	-7.235e+01	0.0000	66.0	7.47%	529.3	1.15%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-27	-6.335e+01	0.0000	117.0	13.25%	1886.4	4.10%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-27	-6.298e+01	0.0000	76.0	8.61%	839.0	1.82%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-27	-6.230e+01	0.0000	99.0	11.21%	1413.7	3.07%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-26	-6.180e+01	0.0000	78.0	8.83%	901.1	1.96%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-23	-5.400e+01	0.0000	51.0	5.78%	429.5	0.93%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-22	-5.081e+01	0.0000	65.0	7.36%	762.4	1.66%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-20	-4.690e+01	0.0000	62.0	7.02%	751.1	1.63%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e-19	-4.586e+01	0.0000	55.0	6.23%	606.0	1.32%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-19	-4.556e+01	0.0000	68.0	7.70%	920.9	2.00%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-19	-4.434e+01	0.0000	56.0	6.34%	650.7	1.41%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-18	-4.349e+01	0.0000	103.0	11.66%	1967.6	4.28%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-18	-4.349e+01	0.0000	39.0	4.42%	310.9	0.68%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-18	-4.285e+01	0.0000	67.0	7.59%	945.0	2.05%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e-18	-4.266e+01	0.0000	31.0	3.51%	185.6	0.40%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-18	-4.162e+01	0.0000	71.0	8.04%	1074.9	2.34%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e-15	-3.659e+01	0.0000	82.0	9.29%	1511.4	3.28%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e-14	-3.449e+01	0.0000	73.0	8.27%	1296.4	2.82%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e-14	-3.341e+01	0.0000	28.0	3.17%	207.4	0.45%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-13	-3.168e+01	0.0000	73.0	8.27%	1372.5	2.98%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e-13	-3.079e+01	0.0000	110.0	12.46%	2639.1	5.74%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e-13	-3.072e+01	0.0000	47.0	5.32%	656.8	1.43%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e-13	-3.009e+01	0.0000	30.0	3.40%	276.0	0.60%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e-12	-2.933e+01	0.0000	21.0	2.38%	126.2	0.27%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e-12	-2.857e+01	0.0000	87.0	9.85%	1925.1	4.18%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e-11	-2.549e+01	0.0000	34.0	3.85%	425.8	0.93%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e-10	-2.485e+01	0.0000	139.0	15.74%	4030.4	8.76%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e-10	-2.471e+01	0.0000	30.0	3.40%	344.3	0.75%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e-10	-2.455e+01	0.0000	42.0	4.76%	647.1	1.41%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e-9	-2.238e+01	0.0000	63.0	7.13%	1343.1	2.92%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e-9	-2.125e+01	0.0000	20.0	2.27%	177.5	0.39%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e-8	-1.898e+01	0.0000	63.0	7.13%	1469.5	3.19%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e-7	-1.830e+01	0.0000	18.0	2.04%	170.2	0.37%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e-7	-1.706e+01	0.0000	40.0	4.53%	777.3	1.69%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e-6	-1.612e+01	0.0000	15.0	1.70%	135.2	0.29%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-6	-1.497e+01	0.0000	20.0	2.27%	261.5	0.57%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e-6	-1.462e+01	0.0000	49.0	5.55%	1160.4	2.52%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e-6	-1.447e+01	0.0000	56.0	6.34%	1415.0	3.08%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e-5	-1.336e+01	0.0000	73.0	8.27%	2115.9	4.60%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e-5	-1.237e+01	0.0000	35.0	3.96%	770.7	1.68%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-5	-1.226e+01	0.0000	44.0	4.98%	1085.8	2.36%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e-5	-1.212e+01	0.0000	59.0	6.68%	1646.2	3.58%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e-5	-1.209e+01	0.0000	55.0	6.23%	1496.6	3.25%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e-5	-1.200e+01	0.0000	23.0	2.60%	404.2	0.88%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e-5	-1.182e+01	0.0000	48.0	5.44%	1250.1	2.72%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e-4	-1.150e+01	0.0001	11.0	1.25%	107.1	0.23%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e-4	-1.115e+01	0.0001	61.0	6.91%	1780.1	3.87%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e-4	-1.099e+01	0.0001	40.0	4.53%	999.9	2.17%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e-4	-1.075e+01	0.0001	39.0	4.42%	974.4	2.12%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e-4	-1.040e+01	0.0002	90.0	10.19%	3019.6	6.56%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-4	-9.767e+00	0.0003	55.0	6.23%	1631.8	3.55%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e-4	-9.762e+00	0.0003	139.0	15.74%	5233.1	11.37%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e-4	-9.485e+00	0.0004	24.0	2.72%	509.1	1.11%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e-4	-9.229e+00	0.0005	31.0	3.51%	757.4	1.65%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e-3	-8.655e+00	0.0009	4.0	0.45%	14.6	0.03%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e-3	-8.465e+00	0.0011	8.0	0.91%	81.3	0.18%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e-3	-8.410e+00	0.0011	56.0	6.34%	1763.2	3.83%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e-3	-8.111e+00	0.0015	32.0	3.62%	845.5	1.84%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-3	-7.680e+00	0.0023	102.0	11.55%	3807.0	8.27%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-3	-7.471e+00	0.0028	38.0	4.30%	1108.8	2.41%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e-3	-7.212e+00	0.0035	12.0	1.36%	204.5	0.44%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e-3	-7.155e+00	0.0037	11.0	1.25%	177.5	0.39%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e-3	-6.968e+00	0.0044	17.0	1.93%	366.6	0.80%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e-3	-6.944e+00	0.0044	45.0	5.10%	1422.4	3.09%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e-3	-6.941e+00	0.0044	83.0	9.40%	3044.2	6.62%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e-2	-5.727e+00	0.0146	252.0	28.54%	11266.5	24.49%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-2	-5.622e+00	0.0161	28.0	3.17%	831.8	1.81%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-2	-5.597e+00	0.0163	36.0	4.08%	1154.9	2.51%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e-2	-5.449e+00	0.0186	10.0	1.13%	190.5	0.41%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e-2	-5.421e+00	0.0189	38.0	4.30%	1250.9	2.72%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-2	-5.367e+00	0.0198	162.0	18.35%	6941.9	15.09%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e-2	-4.779e+00	0.0351	9.0	1.02%	178.5	0.39%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-2	-4.701e+00	0.0376	68.0	7.70%	2634.4	5.73%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e-2	-4.678e+00	0.0380	9.0	1.02%	181.5	0.39%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e-1	-4.527e+00	0.0437	34.0	3.85%	1156.8	2.51%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e-1	-4.376e+00	0.0503	4.0	0.45%	46.4	0.10%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e-1	-4.313e+00	0.0530	10.0	1.13%	226.3	0.49%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-1	-4.185e+00	0.0596	36.0	4.08%	1272.2	2.77%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e-1	-4.149e+00	0.0611	38.0	4.30%	1362.8	2.96%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e-1	-4.122e+00	0.0621	15.0	1.70%	415.2	0.90%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-1	-3.984e+00	0.0706	12.0	1.36%	310.2	0.67%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-1	-3.937e+00	0.0732	163.0	18.46%	7282.8	15.83%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e-1	-3.900e+00	0.0752	13.0	1.47%	351.6	0.76%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-1	-3.876e+00	0.0762	20.0	2.27%	626.6	1.36%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e-1	-3.824e+00	0.0795	16.0	1.81%	470.6	1.02%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e-1	-3.817e+00	0.0795	20.0	2.27%	630.5	1.37%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e-1	-3.633e+00	0.0943	45.0	5.10%	1728.3	3.76%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e-1	-3.612e+00	0.0954	18.0	2.04%	563.4	1.22%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e-1	-3.452e+00	0.1109	18.0	2.04%	574.5	1.25%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e-1	-3.440e+00	0.1111	9.0	1.02%	225.1	0.49%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-1	-3.417e+00	0.1126	4.0	0.45%	62.5	0.14%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e-1	-3.401e+00	0.1135	8.0	0.91%	191.1	0.42%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e-1	-3.350e+00	0.1182	40.0	4.53%	1537.2	3.34%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-1	-3.320e+00	0.1208	4.0	0.45%	64.3	0.14%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e-1	-3.306e+00	0.1213	141.0	15.97%	6351.5	13.80%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e-1	-3.244e+00	0.1280	7.0	0.79%	162.1	0.35%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e-1	-3.233e+00	0.1281	9.0	1.02%	234.2	0.51%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-1	-3.231e+00	0.1281	12.0	1.36%	349.0	0.76%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e-1	-3.206e+00	0.1294	23.0	2.60%	803.1	1.75%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e-1	-3.177e+00	0.1321	8.0	0.91%	200.1	0.43%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e-1	-3.073e+00	0.1452	94.0	10.65%	4116.0	8.95%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e-1	-3.017e+00	0.1522	25.0	2.83%	907.7	1.97%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e-1	-2.876e+00	0.1738	56.0	6.34%	2341.7	5.09%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e-1	-2.847e+00	0.1774	52.0	5.89%	2158.6	4.69%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e-1	-2.837e+00	0.1778	76.0	8.61%	3298.3	7.17%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e-1	-2.828e+00	0.1780	96.0	10.87%	4265.4	9.27%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e-1	-2.816e+00	0.1785	91.0	10.31%	4025.7	8.75%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e-1	-2.774e+00	0.1847	26.0	2.94%	976.2	2.12%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e-1	-2.730e+00	0.1914	21.0	2.38%	760.5	1.65%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e-1	-2.729e+00	0.1914	50.0	5.66%	2083.9	4.53%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-1	-2.727e+00	0.1914	16.0	1.81%	545.9	1.19%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e-1	-2.695e+00	0.1935	4.0	0.45%	79.9	0.17%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e-1	-2.695e+00	0.1935	2.0	0.23%	22.4	0.05%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e-1	-2.679e+00	0.1936	97.0	10.99%	4347.1	9.45%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e-1	-2.643e+00	0.1991	34.0	3.85%	1353.1	2.94%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e-1	-2.643e+00	0.1991	10.0	1.13%	303.3	0.66%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e-1	-2.643e+00	0.1991	10.0	1.13%	303.8	0.66%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-1	-2.635e+00	0.1991	13.0	1.47%	426.6	0.93%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e-1	-2.628e+00	0.1991	16.0	1.81%	553.4	1.20%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e-1	-2.628e+00	0.1991	70.0	7.93%	3051.3	6.63%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e-1	-2.618e+00	0.1991	3.0	0.34%	50.1	0.11%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e-1	-2.610e+00	0.1991	7.0	0.79%	188.5	0.41%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e-1	-2.601e+00	0.1991	38.0	4.30%	1543.3	3.35%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e-1	-2.577e+00	0.1991	43.0	4.87%	1779.9	3.87%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e-1	-2.559e+00	0.2012	51.0	5.78%	2158.7	4.69%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e-1	-2.518e+00	0.2082	18.0	2.04%	649.0	1.41%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-1	-2.484e+00	0.2137	3.0	0.34%	53.2	0.12%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-1	-2.458e+00	0.2180	34.0	3.85%	1378.5	3.00%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e-1	-2.456e+00	0.2180	4.0	0.45%	86.4	0.19%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-1	-2.453e+00	0.2180	69.0	7.81%	3038.1	6.60%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e-1	-2.400e+00	0.2262	36.0	4.08%	1480.0	3.22%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e-1	-2.357e+00	0.2346	57.0	6.46%	2480.7	5.39%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e-1	-2.336e+00	0.2379	41.0	4.64%	1723.1	3.75%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-2.289e+00	0.2476	34.0	3.85%	1402.1	3.05%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-2.266e+00	0.2518	39.0	4.42%	1640.0	3.56%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-2.251e+00	0.2539	5.0	0.57%	129.6	0.28%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-2.212e+00	0.2622	50.0	5.66%	2172.1	4.72%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-2.171e+00	0.2714	81.0	9.17%	3685.4	8.01%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-2.151e+00	0.2750	143.0	16.19%	6768.5	14.71%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-2.133e+00	0.2783	28.0	3.17%	1145.9	2.49%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-2.123e+00	0.2793	11.0	1.25%	380.8	0.83%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-2.088e+00	0.2872	6.0	0.68%	175.8	0.38%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-2.068e+00	0.2913	5.0	0.57%	137.1	0.30%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-2.066e+00	0.2913	29.0	3.28%	1201.2	2.61%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-2.027e+00	0.2997	4.0	0.45%	101.9	0.22%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-1.995e+00	0.3075	24.0	2.72%	978.8	2.13%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-1.898e+00	0.3367	82.0	9.29%	3804.2	8.27%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-1.863e+00	0.3467	7.0	0.79%	229.9	0.50%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-1.857e+00	0.3467	30.0	3.40%	1280.6	2.78%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-1.816e+00	0.3590	64.0	7.25%	2937.4	6.38%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-1.815e+00	0.3590	20.0	2.27%	816.5	1.77%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	-1.796e+00	0.3618	2.0	0.23%	38.9	0.08%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-1.742e+00	0.3796	35.0	3.96%	1539.0	3.35%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-1.711e+00	0.3892	3.0	0.34%	76.7	0.17%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-1.687e+00	0.3964	10.0	1.13%	373.9	0.81%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-1.651e+00	0.4082	35.0	3.96%	1556.2	3.38%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-1.622e+00	0.4180	15.0	1.70%	608.0	1.32%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-1.602e+00	0.4241	99.0	11.21%	4741.3	10.31%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e0	-1.593e+00	0.4252	30.0	3.40%	1325.3	2.88%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-1.588e+00	0.4252	6.0	0.68%	205.4	0.45%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-1.588e+00	0.4252	36.0	4.08%	1617.4	3.52%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-1.566e+00	0.4294	66.0	7.47%	3101.4	6.74%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-1.566e+00	0.4294	4.0	0.45%	122.5	0.27%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-1.566e+00	0.4294	4.0	0.45%	122.5	0.27%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-1.545e+00	0.4312	5.0	0.57%	165.2	0.36%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-1.528e+00	0.4362	4.0	0.45%	124.2	0.27%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-1.511e+00	0.4413	17.0	1.93%	716.2	1.56%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-1.501e+00	0.4433	109.0	12.34%	5280.1	11.48%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-1.474e+00	0.4528	21.0	2.38%	912.8	1.98%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-1.465e+00	0.4546	30.0	3.40%	1349.3	2.93%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-1.439e+00	0.4643	40.0	4.53%	1845.9	4.01%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-1.429e+00	0.4663	16.0	1.81%	680.4	1.48%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-1.401e+00	0.4769	9.0	1.02%	356.0	0.77%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-1.394e+00	0.4778	72.0	8.15%	3452.5	7.50%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-1.390e+00	0.4778	78.0	8.83%	3755.3	8.16%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-1.386e+00	0.4778	6.0	0.68%	220.1	0.48%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-1.384e+00	0.4778	103.0	11.66%	5020.7	10.91%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-1.364e+00	0.4820	21.0	2.38%	930.4	2.02%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-1.359e+00	0.4821	86.0	9.74%	4169.6	9.06%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-1.334e+00	0.4920	9.0	1.02%	362.3	0.79%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-1.328e+00	0.4920	40.0	4.53%	1871.5	4.07%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-1.317e+00	0.4952	12.0	1.36%	505.1	1.10%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	-1.279e+00	0.5119	1.0	0.11%	17.1	0.04%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-1.267e+00	0.5152	73.0	8.27%	3544.4	7.70%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-1.260e+00	0.5163	9.0	1.02%	370.2	0.80%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-1.259e+00	0.5163	75.0	8.49%	3648.2	7.93%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-1.242e+00	0.5206	48.0	5.44%	2293.4	4.98%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-1.234e+00	0.5219	3.0	0.34%	98.0	0.21%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e0	-1.233e+00	0.5219	81.0	9.17%	3961.8	8.61%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-1.230e+00	0.5219	32.0	3.62%	1497.3	3.25%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-1.225e+00	0.5219	42.0	4.76%	1997.9	4.34%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-1.221e+00	0.5219	87.0	9.85%	4270.8	9.28%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-1.219e+00	0.5219	23.0	2.60%	1054.1	2.29%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-1.217e+00	0.5219	3.0	0.34%	99.4	0.22%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-1.210e+00	0.5219	12.0	1.36%	519.2	1.13%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-1.198e+00	0.5219	37.0	4.19%	1754.7	3.81%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-1.163e+00	0.5364	29.0	3.28%	1363.2	2.96%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-1.144e+00	0.5442	6.0	0.68%	241.4	0.52%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-1.122e+00	0.5538	4.0	0.45%	150.0	0.33%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e0	-1.105e+00	0.5609	12.0	1.36%	534.5	1.16%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-1.091e+00	0.5660	23.0	2.60%	1080.2	2.35%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-1.088e+00	0.5660	35.0	3.96%	1682.1	3.66%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-1.071e+00	0.5723	156.0	17.67%	7871.3	17.11%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-1.056e+00	0.5784	73.0	8.27%	3621.9	7.87%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e0	-1.039e+00	0.5857	16.0	1.81%	742.2	1.61%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-1.034e+00	0.5859	4.0	0.45%	157.3	0.34%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-1.028e+00	0.5866	7.0	0.79%	301.6	0.66%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-1.026e+00	0.5866	66.0	7.47%	3275.8	7.12%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-1.022e+00	0.5866	4.0	0.45%	158.7	0.35%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-1.021e+00	0.5866	22.0	2.49%	1045.7	2.27%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-1.018e+00	0.5866	41.0	4.64%	2005.8	4.36%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-9.750e-01	0.6048	10.0	1.13%	455.7	0.99%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-9.718e-01	0.6048	46.0	5.21%	2274.0	4.94%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-9.624e-01	0.6072	27.0	3.06%	1311.7	2.85%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-9.402e-01	0.6181	8.0	0.91%	361.6	0.79%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e0	-9.281e-01	0.6229	2.0	0.23%	71.1	0.15%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-8.674e-01	0.6590	21.0	2.38%	1030.5	2.24%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	-8.511e-01	0.6670	1.0	0.11%	29.3	0.06%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-8.387e-01	0.6725	13.0	1.47%	629.2	1.37%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-8.240e-01	0.6794	31.0	3.51%	1554.4	3.38%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-8.081e-01	0.6875	12.0	1.36%	584.1	1.27%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-7.811e-01	0.7033	4.0	0.45%	181.1	0.39%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-7.776e-01	0.7033	6.0	0.68%	283.0	0.62%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e0	-7.674e-01	0.7070	9.0	1.02%	438.7	0.95%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-7.637e-01	0.7070	10.0	1.13%	490.0	1.07%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-7.597e-01	0.7070	37.0	4.19%	1885.6	4.10%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-7.537e-01	0.7079	43.0	4.87%	2198.9	4.78%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-7.446e-01	0.7114	29.0	3.28%	1476.4	3.21%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-7.423e-01	0.7114	6.0	0.68%	288.2	0.63%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-7.356e-01	0.7120	18.0	2.04%	909.7	1.98%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-7.218e-01	0.7189	6.0	0.68%	291.5	0.63%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-7.207e-01	0.7189	17.0	1.93%	862.0	1.87%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-7.184e-01	0.7189	8.0	0.91%	395.2	0.86%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-7.105e-01	0.7189	2.0	0.23%	86.7	0.19%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-6.901e-01	0.7302	8.0	0.91%	400.0	0.87%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-6.719e-01	0.7407	7.0	0.79%	351.2	0.76%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-6.661e-01	0.7420	7.0	0.79%	352.4	0.77%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-6.615e-01	0.7425	18.0	2.04%	929.7	2.02%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-6.560e-01	0.7437	14.0	1.59%	721.3	1.57%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-6.400e-01	0.7526	5.0	0.57%	251.2	0.55%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-6.385e-01	0.7526	38.0	4.30%	1984.0	4.31%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-6.371e-01	0.7526	67.0	7.59%	3502.2	7.61%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-6.324e-01	0.7526	3.0	0.34%	147.0	0.32%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-6.094e-01	0.7641	30.0	3.40%	1576.9	3.43%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-6.052e-01	0.7643	29.0	3.28%	1525.6	3.32%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-5.968e-01	0.7678	53.0	6.00%	2790.8	6.07%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e0	-5.828e-01	0.7757	12.0	1.36%	634.2	1.38%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-5.827e-01	0.7757	32.0	3.62%	1692.7	3.68%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-5.750e-01	0.7758	12.0	1.36%	636.4	1.38%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-5.636e-01	0.7818	4.0	0.45%	209.1	0.45%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-5.618e-01	0.7818	72.0	8.15%	3809.0	8.28%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-5.506e-01	0.7861	4.0	0.45%	211.6	0.46%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-5.465e-01	0.7864	15.0	1.70%	804.3	1.75%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-5.390e-01	0.7893	24.0	2.72%	1286.9	2.80%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-5.193e-01	0.8020	4.0	0.45%	216.8	0.47%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-4.753e-01	0.8351	26.0	2.94%	1420.0	3.09%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-4.695e-01	0.8368	48.0	5.44%	2596.3	5.64%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-4.580e-01	0.8434	9.0	1.02%	505.0	1.10%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-4.498e-01	0.8472	12.0	1.36%	672.4	1.46%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-4.376e-01	0.8545	17.0	1.93%	949.7	2.06%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-4.284e-01	0.8593	160.0	18.12%	8550.2	18.58%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-4.277e-01	0.8593	8.0	0.91%	458.1	1.00%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-4.234e-01	0.8593	57.0	6.46%	3105.4	6.75%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-4.209e-01	0.8593	3.0	0.34%	176.3	0.38%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-4.199e-01	0.8593	71.0	8.04%	3853.0	8.37%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	-4.173e-01	0.8593	1.0	0.11%	56.2	0.12%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-4.156e-01	0.8593	6.0	0.68%	349.3	0.76%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-4.154e-01	0.8593	29.0	3.28%	1609.7	3.50%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-4.026e-01	0.8593	20.0	2.27%	1128.0	2.45%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-3.886e-01	0.8660	59.0	6.68%	3237.5	7.04%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-3.878e-01	0.8660	19.0	2.15%	1079.0	2.35%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e0	-3.719e-01	0.8744	63.0	7.13%	3464.7	7.53%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-3.701e-01	0.8744	57.0	6.46%	3144.5	6.83%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-3.694e-01	0.8744	12.0	1.36%	700.9	1.52%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-3.662e-01	0.8744	13.0	1.47%	757.7	1.65%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-3.638e-01	0.8744	31.0	3.51%	1746.4	3.80%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-3.342e-01	0.8925	16.0	1.81%	938.3	2.04%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-3.266e-01	0.8961	18.0	2.04%	1053.8	2.29%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-3.179e-01	0.9009	9.0	1.02%	550.1	1.20%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-3.124e-01	0.9029	6.0	0.68%	378.9	0.82%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	-3.089e-01	0.9029	1.0	0.11%	69.8	0.15%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-2.989e-01	0.9089	76.0	8.61%	4228.0	9.19%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-2.958e-01	0.9089	3.0	0.34%	202.3	0.44%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-2.907e-01	0.9103	13.0	1.47%	790.8	1.72%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-2.864e-01	0.9112	77.0	8.72%	4295.6	9.34%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-2.857e-01	0.9112	20.0	2.27%	1187.7	2.58%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-2.816e-01	0.9112	11.0	1.25%	680.4	1.48%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-2.712e-01	0.9160	9.0	1.02%	569.9	1.24%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-2.387e-01	0.9431	9.0	1.02%	584.1	1.27%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-2.366e-01	0.9431	47.0	5.32%	2719.1	5.91%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-2.319e-01	0.9433	16.0	1.81%	994.6	2.16%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-2.195e-01	0.9520	8.0	0.91%	534.7	1.16%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-2.183e-01	0.9520	146.0	16.53%	8087.3	17.58%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-2.175e-01	0.9520	8.0	0.91%	535.3	1.16%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-2.175e-01	0.9520	17.0	1.93%	1061.4	2.31%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-2.159e-01	0.9520	10.0	1.13%	655.4	1.42%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-2.053e-01	0.9520	2.0	0.23%	161.2	0.35%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-1.955e-01	0.9564	36.0	4.08%	2153.9	4.68%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-1.871e-01	0.9614	9.0	1.02%	612.3	1.33%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-1.858e-01	0.9614	3.0	0.34%	236.6	0.51%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	-1.833e-01	0.9614	1.0	0.11%	94.0	0.20%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.833e-01	0.9614	3.0	0.34%	237.7	0.52%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-1.818e-01	0.9614	5.0	0.57%	368.4	0.80%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-1.815e-01	0.9614	39.0	4.42%	2336.3	5.08%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	-1.721e-01	0.9614	1.0	0.11%	96.7	0.21%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-1.592e-01	0.9670	58.0	6.57%	3421.6	7.44%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-1.554e-01	0.9678	6.0	0.68%	446.2	0.97%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-1.232e-01	0.9963	4.0	0.45%	335.7	0.73%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-1.211e-01	0.9963	1.0	0.11%	113.6	0.25%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-1.195e-01	0.9963	12.0	1.36%	847.5	1.84%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-1.054e-01	1.0000	98.0	11.10%	5731.8	12.46%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-1.048e-01	1.0000	5.0	0.57%	416.3	0.90%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-9.639e-02	1.0000	44.0	4.98%	2748.2	5.97%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-9.615e-02	1.0000	2.0	0.23%	208.7	0.45%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-9.542e-02	1.0000	5.0	0.57%	424.8	0.92%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-9.141e-02	1.0000	6.0	0.68%	495.5	1.08%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-8.951e-02	1.0000	10.0	1.13%	756.6	1.64%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-8.492e-02	1.0000	22.0	2.49%	1495.1	3.25%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-8.447e-02	1.0000	2.0	0.23%	216.9	0.47%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-8.447e-02	1.0000	98.0	11.10%	5792.5	12.59%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-8.408e-02	1.0000	1.0	0.11%	131.4	0.29%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-8.212e-02	1.0000	71.0	8.04%	4303.5	9.35%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-7.997e-02	1.0000	143.0	16.19%	8267.7	17.97%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-7.912e-02	1.0000	58.0	6.57%	3582.3	7.79%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-7.456e-02	1.0000	1.0	0.11%	138.0	0.30%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e0	-5.533e-02	1.0000	1.0	0.11%	152.7	0.33%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-5.512e-02	1.0000	36.0	4.08%	2390.6	5.20%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-4.413e-02	1.0000	8.0	0.91%	697.9	1.52%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-4.270e-02	1.0000	64.0	7.25%	4053.3	8.81%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-3.759e-02	1.0000	22.0	2.49%	1610.6	3.50%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-2.225e-02	1.0000	3.0	0.34%	384.6	0.84%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-1.909e-02	1.0000	17.0	1.93%	1379.7	3.00%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-7.017e-03	1.0000	2.0	0.23%	366.1	0.80%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-1.577e-03	1.0000	12.0	1.36%	1284.0	2.79%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e0	-1.506e-03	1.0000	5.0	0.57%	738.9	1.61%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-4.730e-04	1.0000	56.0	6.34%	4309.8	9.37%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e0	-7.400e-05	1.0000	5.0	0.57%	939.8	2.04%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	39.9	0.09%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	24.5	0.05%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	22.0	0.05%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	8.6	0.02%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	0.000e+00	1.0000	0.0	0.00%	23.0	0.05%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	22.8	0.05%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	21.2	0.05%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	0.000e+00	1.0000	0.0	0.00%	48.5	0.11%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	2.5	0.01%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	106.3	0.23%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	13.7	0.03%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	8.0	0.02%