Information for 7-GAWGCYGCSAAMG (Motif 7)

A C T G C G T A C G T A A C T G A G T C A G C T A C T G A G T C A T C G C T G A C G T A G T C A A C T G
Reverse Opposite:
A G T C A C G T A C G T A G C T A T G C A C T G A G T C C T G A A C T G A G T C C G A T A C G T A G T C
p-value:1e-13
log p-value:-3.033e+01
Information Content per bp:1.878
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.7 +/- 31.6bp
Average Position of motif in Background64.2 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAWGCYGCSAAMG
-AAGGTGTKAA--
 A C T G C G T A C G T A A C T G A G T C A G C T A C T G A G T C A T C G C T G A C G T A G T C A A C T G
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GAWGCYGCSAAMG
-----TGCCAA--
 A C T G C G T A C G T A A C T G A G T C A G C T A C T G A G T C A T C G C T G A C G T A G T C A A C T G
A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GAWGCYGCSAAMG
---CGTGCCAAG-
 A C T G C G T A C G T A A C T G A G T C A G C T A C T G A G T C A T C G C T G A C G T A G T C A A C T G
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GAWGCYGCSAAMG
---GGTGCCAAGT
 A C T G C G T A C G T A A C T G A G T C A G C T A C T G A G T C A T C G C T G A C G T A G T C A A C T G
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAWGCYGCSAAMG
NGAAGC--------
 A C G T A C T G C G T A C G T A A C T G A G T C A G C T A C T G A G T C A T C G C T G A C G T A G T C A A C T G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAWGCYGCSAAMG
CGCAGCTGCG----
 A C G T A C T G C G T A C G T A A C T G A G T C A G C T A C T G A G T C A T C G C T G A C G T A G T C A A C T G
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAWGCYGCSAAMG--
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C T G C G T A C G T A A C T G A G T C A G C T A C T G A G T C A T C G C T G A C G T A G T C A A C T G A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GAWGCYGCSAAMG-
AGATGCTRCTRCCHT
 A C G T A C T G C G T A C G T A A C T G A G T C A G C T A C T G A G T C A T C G C T G A C G T A G T C A A C T G A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GAWGCYGCSAAMG
----TTGCCAAG-
 A C T G C G T A C G T A A C T G A G T C A G C T A C T G A G T C A T C G C T G A C G T A G T C A A C T G
A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GAWGCYGCSAAMG
NNNNAGCAGCTGCTGAN-
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C A G C T A C T G A G T C A T C G C T G A C G T A G T C A A C T G
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T