Information for 6-CTGTARTTGCWCA (Motif 5)

G T A C A C G T C A T G A C G T G T C A T C A G A G C T A C G T A C T G T G A C C G A T T G A C C T G A
Reverse Opposite:
G A C T A C T G G C T A A C T G T G A C G T C A C T G A A G T C C A G T C G T A G A T C C G T A C A T G
p-value:1e-15
log p-value:-3.538e+01
Information Content per bp:1.676
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif59.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets51.7 +/- 22.1bp
Average Position of motif in Background54.9 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTGTARTTGCWCA
GCTGTGGTTT----
 A C G T G T A C A C G T C A T G A C G T G T C A T C A G A G C T A C G T A C T G T G A C C G A T T G A C C T G A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGTARTTGCWCA
CTGTGGTTTN---
 G T A C A C G T C A T G A C G T G T C A T C A G A G C T A C G T A C T G T G A C C G A T T G A C C T G A
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T

PH0061.1_Hoxb6/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTGTARTTGCWCA--
NNNGTAATTACNNATA
 A C G T G T A C A C G T C A T G A C G T G T C A T C A G A G C T A C G T A C T G T G A C C G A T T G A C C T G A A C G T A C G T
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGTARTTGCWCA
NNTGTGGTTT----
 A C G T G T A C A C G T C A T G A C G T G T C A T C A G A G C T A C G T A C T G T G A C C G A T T G A C C T G A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTGTARTTGCWCA
NNHTGTGGTTWN---
 A C G T A C G T G T A C A C G T C A T G A C G T G T C A T C A G A G C T A C G T A C T G T G A C C G A T T G A C C T G A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTGTARTTGCWCA
GTCTGTGGTTT----
 A C G T A C G T G T A C A C G T C A T G A C G T G T C A T C A G A G C T A C G T A C T G T G A C C G A T T G A C C T G A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTGTARTTGCWCA
NNNTGTTGTTGTTNG
 A C G T A C G T G T A C A C G T C A T G A C G T G T C A T C A G A G C T A C G T A C T G T G A C C G A T T G A C C T G A
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PH0158.1_Rhox11_2/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CTGTARTTGCWCA
AGGACGCTGTAAAGGGA--
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T C A T G A C G T G T C A T C A G A G C T A C G T A C T G T G A C C G A T T G A C C T G A
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTGTARTTGCWCA
--NTAATTGG---
 G T A C A C G T C A T G A C G T G T C A T C A G A G C T A C G T A C T G T G A C C G A T T G A C C T G A
A C G T A C G T A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T A C G T

Dlx4/MA0881.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTGTARTTGCWCA
--NTAATTGN---
 G T A C A C G T C A T G A C G T G T C A T C A G A G C T A C G T A C T G T G A C C G A T T G A C C T G A
A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G A C G T A C G T A C G T