Information for 20-AAAAATTGHCWGA (Motif 23)

C T G A G C T A C G T A C G T A T C G A C G A T C G A T A T C G G C T A T G A C C G T A A T C G G T C A
Reverse Opposite:
A C G T T A G C C G A T A C T G C G A T A T G C G C T A C G T A A G C T C G A T A C G T C A G T A G C T
p-value:1e-6
log p-value:-1.567e+01
Information Content per bp:1.678
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif85.2
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets50.9 +/- 29.2bp
Average Position of motif in Background52.2 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AAAAATTGHCWGA
GAAAAAATTGCAAGG
 A C G T A C G T C T G A G C T A C G T A C G T A T C G A C G A T C G A T A T C G G C T A T G A C C G T A A T C G G T C A
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AAAAATTGHCWGA
ATGCTAAAAATAGAA---
 A C G T A C G T A C G T A C G T A C G T C T G A G C T A C G T A C G T A T C G A C G A T C G A T A T C G G C T A T G A C C G T A A T C G G T C A
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAAAATTGHCWGA
DCYAAAAATAGM----
 A C G T A C G T A C G T C T G A G C T A C G T A C G T A T C G A C G A T C G A T A T C G G C T A T G A C C G T A A T C G G T C A
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AAAAATTGHCWGA
GCTAAAAATAGC----
 A C G T A C G T A C G T C T G A G C T A C G T A C G T A T C G A C G A T C G A T A T C G G C T A T G A C C G T A A T C G G T C A
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAAAATTGHCWGA--
GGAAAAATTGTTAGGAA
 A C G T A C G T C T G A G C T A C G T A C G T A T C G A C G A T C G A T A T C G G C T A T G A C C G T A A T C G G T C A A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AAAAATTGHCWGA
TCTAAAAATAGA----
 A C G T A C G T A C G T C T G A G C T A C G T A C G T A T C G A C G A T C G A T A T C G G C T A T G A C C G T A A T C G G T C A
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------AAAAATTGHCWGA
TACTGGAAAAAAAA------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A G C T A C G T A C G T A T C G A C G A T C G A T A T C G G C T A T G A C C G T A A T C G G T C A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAAAATTGHCWGA
ACTATAAATAGA----
 A C G T A C G T A C G T C T G A G C T A C G T A C G T A T C G A C G A T C G A T A T C G G C T A T G A C C G T A A T C G G T C A
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AAAAATTGHCWGA
KCCAAAAATAGC----
 A C G T A C G T A C G T C T G A G C T A C G T A C G T A T C G A C G A T C G A T A T C G G C T A T G A C C G T A A T C G G T C A
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAAAATTGHCWGA
CCAAAAATAG-----
 A C G T A C G T C T G A G C T A C G T A C G T A T C G A C G A T C G A T A T C G G C T A T G A C C G T A A T C G G T C A
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T