Information for 12-CTCTGAAGTG (Motif 19)

A T G C A C G T A G T C A C G T A C T G G T C A C T G A T C A G A C G T A C T G
Reverse Opposite:
G T A C G T C A A G T C G A C T A C G T G T A C C G T A T C A G C G T A T A C G
p-value:1e-8
log p-value:-1.862e+01
Information Content per bp:1.834
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.38%
Number of Background Sequences with motif229.8
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets46.8 +/- 26.5bp
Average Position of motif in Background50.5 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGAAGTG
CCTTTGAWGT-
 A C G T A T G C A C G T A G T C A C G T A C T G G T C A C T G A T C A G A C G T A C T G
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGAAGTG
CCTTTGATGT-
 A C G T A T G C A C G T A G T C A C G T A C T G G T C A C T G A T C A G A C G T A C T G
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CTCTGAAGTG-
--NTCAAGTGG
 A T G C A C G T A G T C A C G T A C T G G T C A C T G A T C A G A C G T A C T G A C G T
A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

PH0111.1_Nkx2-2/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGAAGTG-----
NANTTTCAAGTGGTTAN
 A C G T A C G T A T G C A C G T A G T C A C G T A C T G G T C A C T G A T C A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CTCTGAAGTG
TNCCTTTGATGT-
 A C G T A C G T A C G T A T G C A C G T A G T C A C G T A C T G G T C A C T G A T C A G A C G T A C T G
C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CTCTGAAGTG--
--NTCAAGTGGN
 A T G C A C G T A G T C A C G T A C T G G T C A C T G A T C A G A C G T A C T G A C G T A C G T
A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CTCTGAAGTG-
TNCCTTTGATCTTN
 A C G T A C G T A C G T A T G C A C G T A G T C A C G T A C T G G T C A C T G A T C A G A C G T A C T G A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CTCTGAAGTG--
--CTYRAGTGSY
 A T G C A C G T A G T C A C G T A C T G G T C A C T G A T C A G A C G T A C T G A C G T A C G T
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTCTGAAGTG--
--BTBRAGTGSN
 A T G C A C G T A G T C A C G T A C T G G T C A C T G A T C A G A C G T A C T G A C G T A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

NKX3-2/MA0122.2/Jaspar

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CTCTGAAGTG--
---TTAAGTGGN
 A T G C A C G T A G T C A C G T A C T G G T C A C T G A T C A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T