Information for 8-CGCCAGAGAC (Motif 16)

A T G C A C T G A T G C A T G C C T G A A C T G C T G A T A C G G T C A T A G C
Reverse Opposite:
A C T G A C G T A T G C A G C T A G T C A G C T A T C G A T C G A G T C T A C G
p-value:1e-8
log p-value:-2.062e+01
Information Content per bp:1.838
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif146.2
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets47.1 +/- 26.0bp
Average Position of motif in Background54.8 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB33/MA0527.1/Jaspar

Match Rank:1
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------CGCCAGAGAC
NAGNTCTCGCGAGAN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A T G C A T G C C T G A A C T G C T G A T A C G G T C A T A G C
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGCCAGAGAC
ATGCCAGACN-
 A C G T A T G C A C T G A T G C A T G C C T G A A C T G C T G A T A C G G T C A T A G C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGCCAGAGAC----
CAAATCCAGACATCACA
 A C G T A C G T A C G T A T G C A C T G A T G C A T G C C T G A A C T G C T G A T A C G G T C A T A G C A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGCCAGAGAC
--CCAGACAG
 A T G C A C T G A T G C A T G C C T G A A C T G C T G A T A C G G T C A T A G C
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGCCAGAGAC--
--CCAGACRSVB
 A T G C A C T G A T G C A T G C C T G A A C T G C T G A T A C G G T C A T A G C A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

GFX(?)/Promoter/Homer

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CGCCAGAGAC
ATTCTCGCGAGA---
 A C G T A C G T A C G T A C G T A C G T A T G C A C T G A T G C A T G C C T G A A C T G C T G A T A C G G T C A T A G C
T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A A C G T A C G T A C G T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CGCCAGAGAC
GTTCTCGCGAGANCC
 A C G T A C G T A C G T A C G T A C G T A T G C A C T G A T G C A T G C C T G A A C T G C T G A T A C G G T C A T A G C
T A C G G A C T G A C T T G A C A G C T A G T C C A T G G T A C A C T G T C G A A C T G T C G A A C G T A G T C A T G C

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGCCAGAGAC
TGCCAA----
 A T G C A C T G A T G C A T G C C T G A A C T G C T G A T A C G G T C A T A G C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGCCAGAGAC
CGTGCCAAG---
 A C G T A C G T A T G C A C T G A T G C A T G C C T G A A C T G C T G A T A C G G T C A T A G C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CGCCAGAGAC--
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A C G T A T G C A C T G A T G C A T G C C T G A A C T G C T G A T A C G G T C A T A G C A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G