Information for 7-CAACACAACA (Motif 15)

T A G C T G C A G T C A A T G C T C G A G T A C C T G A C G T A T A G C G C T A
Reverse Opposite:
C G A T A T C G G C A T G A C T C A T G A G C T T A C G C A G T A C G T A T C G
p-value:1e-9
log p-value:-2.190e+01
Information Content per bp:1.647
Number of Target Sequences with motif118.0
Percentage of Target Sequences with motif13.36%
Number of Background Sequences with motif3372.6
Percentage of Background Sequences with motif7.33%
Average Position of motif in Targets48.7 +/- 26.4bp
Average Position of motif in Background50.2 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CAACACAACA-----
AACACCAAAACAAAGGA
 A C G T A C G T T A G C T G C A G T C A A T G C T C G A G T A C C T G A C G T A T A G C G C T A A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CAACACAACA----
ATGTCACAACAACAC
 A C G T T A G C T G C A G T C A A T G C T C G A G T A C C T G A C G T A T A G C G C T A A C G T A C G T A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CAACACAACA---
CAAACAACAACACCT
 A C G T A C G T T A G C T G C A G T C A A T G C T C G A G T A C C T G A C G T A T A G C G C T A A C G T A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CAACACAACA--
ATATCAAAACAAAACA
 A C G T A C G T A C G T A C G T T A G C T G C A G T C A A T G C T C G A G T A C C T G A C G T A T A G C G C T A A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------CAACACAACA---
AADGAGVCANYASTACAGNC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G C A G T C A A T G C T C G A G T A C C T G A C G T A T A G C G C T A A C G T A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAACACAACA
AAACCACAGC-
 A C G T T A G C T G C A G T C A A T G C T C G A G T A C C T G A C G T A T A G C G C T A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAACACAACA
NWAACCACADNN
 A C G T A C G T T A G C T G C A G T C A A T G C T C G A G T A C C T G A C G T A T A G C G C T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAACACAACA-----
CCACACAGCAGGAGA
 T A G C T G C A G T C A A T G C T C G A G T A C C T G A C G T A T A G C G C T A A C G T A C G T A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Foxd3/MA0041.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAACACAACA---
-AAACAAACATTC
 T A G C T G C A G T C A A T G C T C G A G T A C C T G A C G T A T A G C G C T A A C G T A C G T A C G T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0141.1_Isgf3g_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CAACACAACA-
GCAAAACATTACTA
 A C G T A C G T A C G T T A G C T G C A G T C A A T G C T C G A G T A C C T G A C G T A T A G C G C T A A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A