Information for 12-CTAAGGMGCCTGC (Motif 10)

A G T C C G A T G T C A C G T A A C T G A T C G G T C A A C T G A G T C A G T C A C G T A T C G A G T C
Reverse Opposite:
A C T G A T G C T C G A A C T G A C T G G T A C A C G T A T G C A G T C A C G T A C G T C G T A A C T G
p-value:1e-10
log p-value:-2.378e+01
Information Content per bp:1.837
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.7 +/- 22.4bp
Average Position of motif in Background40.6 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CTAAGGMGCCTGC---
-----GCGCCTGCGCA
 A G T C C G A T G T C A C G T A A C T G A T C G G T C A A C T G A G T C A G T C A C G T A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTAAGGMGCCTGC
ACAAAGGNBCCT--
 A C G T A G T C C G A T G T C A C G T A A C T G A T C G G T C A A C T G A G T C A G T C A C G T A T C G A G T C
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CTAAGGMGCCTGC--
---SNGCACCTGCHS
 A G T C C G A T G T C A C G T A A C T G A T C G G T C A A C T G A G T C A G T C A C G T A T C G A G T C A C G T A C G T
A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CTAAGGMGCCTGC
--AGCGCGCC---
 A G T C C G A T G T C A C G T A A C T G A T C G G T C A A C T G A G T C A G T C A C G T A T C G A G T C
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CTAAGGMGCCTGC-----
---GGCCYCCTGCTGDGH
 A G T C C G A T G T C A C G T A A C T G A T C G G T C A A C T G A G T C A G T C A C G T A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CTAAGGMGCCTGC----
-----GCGCATGCGCAG
 A G T C C G A T G T C A C G T A A C T G A T C G G T C A A C T G A G T C A G T C A C G T A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

PROX1/MA0794.1/Jaspar

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CTAAGGMGCCTGC
-TAAGGCGTCTTG
 A G T C C G A T G T C A C G T A A C T G A T C G G T C A A C T G A G T C A G T C A C G T A T C G A G T C
A C G T A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CTAAGGMGCCTGC-
----ACATCCTGNT
 A G T C C G A T G T C A C G T A A C T G A T C G G T C A A C T G A G T C A G T C A C G T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CTAAGGMGCCTGC
AACAAAGG-------
 A C G T A C G T A G T C C G A T G T C A C G T A A C T G A T C G G T C A A C T G A G T C A G T C A C G T A T C G A G T C
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-CTAAGGMGCCTGC-
ATAAGGGCGCGCGAT
 A C G T A G T C C G A T G T C A C G T A A C T G A T C G G T C A A C T G A G T C A G T C A C G T A T C G A G T C A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T