Information for 17-CACAAAGTDGGCAGCA (Motif 29)

G T A C C G T A A G T C G T C A C T G A C G T A A C T G C G A T C A G T A C T G A T C G T G A C C G T A C T A G A G T C C T G A
Reverse Opposite:
A G C T C T A G G A T C A C G T A C T G A T G C A G T C G C T A C G T A A G T C C G A T A G C T A C G T A C T G A C G T A C T G
p-value:1e-8
log p-value:-1.933e+01
Information Content per bp:1.786
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.0 +/- 21.1bp
Average Position of motif in Background63.4 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CACAAAGTDGGCAGCA
-ACAAAG---------
 G T A C C G T A A G T C G T C A C T G A C G T A A C T G C G A T C A G T A C T G A T C G T G A C C G T A C T A G A G T C C T G A
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CACAAAGTDGGCAGCA
-ACAAAGGNBCCT---
 G T A C C G T A A G T C G T C A C T G A C G T A A C T G C G A T C A G T A C T G A T C G T G A C C G T A C T A G A G T C C T G A
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CACAAAGTDGGCAGCA
VRRACAAWGG--------
 A C G T A C G T G T A C C G T A A G T C G T C A C T G A C G T A A C T G C G A T C A G T A C T G A T C G T G A C C G T A C T A G A G T C C T G A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CACAAAGTDGGCAGCA
GGAACAAAGR--------
 A C G T A C G T G T A C C G T A A G T C G T C A C T G A C G T A A C T G C G A T C A G T A C T G A T C G T G A C C G T A C T A G A G T C C T G A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CACAAAGTDGGCAGCA
CTCACACAATGGCGC-----
 A C G T A C G T A C G T A C G T G T A C C G T A A G T C G T C A C T G A C G T A A C T G C G A T C A G T A C T G A T C G T G A C C G T A C T A G A G T C C T G A
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C A C G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CACAAAGTDGGCAGCA
---CAAGATGGCGGC-
 G T A C C G T A A G T C G T C A C T G A C G T A A C T G C G A T C A G T A C T G A T C G T G A C C G T A C T A G A G T C C T G A
A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T

Sox2/MA0143.3/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CACAAAGTDGGCAGCA
AACAAAGG--------
 G T A C C G T A A G T C G T C A C T G A C G T A A C T G C G A T C A G T A C T G A T C G T G A C C G T A C T A G A G T C C T G A
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CACAAAGTDGGCAGCA
RACAAWGG--------
 G T A C C G T A A G T C G T C A C T G A C G T A A C T G C G A T C A G T A C T G A T C G T G A C C G T A C T A G A G T C C T G A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CACAAAGTDGGCAGCA
---CAAGATGGCGGC-
 G T A C C G T A A G T C G T C A C T G A C G T A A C T G C G A T C A G T A C T G A T C G T G A C C G T A C T A G A G T C C T G A
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CACAAAGTDGGCAGCA
RNAACAATGG--------
 A C G T A C G T G T A C C G T A A G T C G T C A C T G A C G T A A C T G C G A T C A G T A C T G A T C G T G A C C G T A C T A G A G T C C T G A
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T