Information for 6-ACCAAAGAAG (Motif 28)

T C G A T A G C G A T C G T C A C T G A C G T A A T C G C G T A T G C A A C T G
Reverse Opposite:
A G T C A C G T A C G T T A G C A C G T A G C T A C G T C T A G A T C G A G C T
p-value:1e-8
log p-value:-1.983e+01
Information Content per bp:1.828
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.85%
Number of Background Sequences with motif242.0
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets49.7 +/- 25.8bp
Average Position of motif in Background52.2 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ACCAAAGAAG--
AGAAGAACAAAGGACTA
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C G T C A C T G A C G T A A T C G C G T A T G C A A C T G A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----ACCAAAGAAG--
ATAAGAACAAAGGACTA
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C G T C A C T G A C G T A A T C G C G T A T G C A A C T G A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ACCAAAGAAG
AAACCACAGAN-
A C G T A C G T T C G A T A G C G A T C G T C A C T G A C G T A A T C G C G T A T G C A A C T G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ACCAAAGAAG
NWAACCACADNN-
A C G T A C G T A C G T T C G A T A G C G A T C G T C A C T G A C G T A A T C G C G T A T G C A A C T G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACCAAAGAAG
AAACCACAGC--
A C G T A C G T T C G A T A G C G A T C G T C A C T G A C G T A A T C G C G T A T G C A A C T G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----ACCAAAGAAG--
NNNAGATCAAAGGANNN
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C G T C A C T G A C G T A A T C G C G T A T G C A A C T G A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACCAAAGAAG---
-CCATATATGGNA
T C G A T A G C G A T C G T C A C T G A C G T A A T C G C G T A T G C A A C T G A C G T A C G T A C G T
A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACCAAAGAAG
GGAACAAAGR--
A C G T A C G T T C G A T A G C G A T C G T C A C T G A C G T A A T C G C G T A T G C A A C T G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----ACCAAAGAAG--
TATAGATCAAAGGAAAA
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C G T C A C T G A C G T A A T C G C G T A T G C A A C T G A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACCAAAGAAG
NAAACCACAG---
A C G T A C G T A C G T T C G A T A G C G A T C G T C A C T G A C G T A A T C G C G T A T G C A A C T G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T