Information for 5-AAATGATCATTAA (Motif 17)

C G T A C G T A C T G A A C G T A C T G T C G A A C G T T A G C C G T A A C G T A C G T C G T A G C T A
Reverse Opposite:
C A G T C G A T C G T A T G C A A C G T A T C G C G T A A C G T A G T C C G T A A G C T A C G T A C G T
p-value:1e-10
log p-value:-2.469e+01
Information Content per bp:1.857
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif29.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets53.9 +/- 27.3bp
Average Position of motif in Background48.7 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0073.1_Hoxc9/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAATGATCATTAA----
-GGAGGTCATTAATTAT
 C G T A C G T A C T G A A C G T A C T G T C G A A C G T T A G C C G T A A C G T A C G T C G T A G C T A A C G T A C G T A C G T A C G T
A C G T T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

MAFF/MA0495.1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AAATGATCATTAA--
NAAAANTGCTGACTCAGC
 A C G T A C G T A C G T C G T A C G T A C T G A A C G T A C T G T C G A A C G T T A G C C G T A A C G T A C G T C G T A G C T A A C G T A C G T
C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C

MAFK/MA0496.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAATGATCATTAA-
AAANTGCTGACTNAG
 A C G T C G T A C G T A C T G A A C G T A C T G T C G A A C G T T A G C C G T A A C G T A C G T C G T A G C T A A C G T
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

PB0042.1_Mafk_1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAATGATCATTAA
TAAAAATGCTGACTT-
 A C G T A C G T A C G T C G T A C G T A C T G A A C G T A C T G T C G A A C G T T A G C C G T A A C G T A C G T C G T A G C T A
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:5
Score:0.63
Offset:5
Orientation:forward strand
Alignment:AAATGATCATTAA
-----GTAATTAA
 C G T A C G T A C T G A A C G T A C T G T C G A A C G T T A G C C G T A A C G T A C G T C G T A G C T A
A C G T A C G T A C G T A C G T A C G T T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AAATGATCATTAA
AAAWWTGCTGACWWD
 A C G T A C G T C G T A C G T A C T G A A C G T A C T G T C G A A C G T T A G C C G T A A C G T A C G T C G T A G C T A
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

POU6F2/MA0793.1/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AAATGATCATTAA
---AGCTCATTAT
 C G T A C G T A C T G A A C G T A C T G T C G A A C G T T A G C C G T A A C G T A C G T C G T A G C T A
A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PH0017.1_Cux1_2/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAATGATCATTAA--
TAATGATGATCACTA
 C G T A C G T A C T G A A C G T A C T G T C G A A C G T T A G C C G T A A C G T A C G T C G T A G C T A A C G T A C G T
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:9
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:AAATGATCATTAA-
------YCATTAMC
 C G T A C G T A C T G A A C G T A C T G T C G A A C G T T A G C C G T A A C G T A C G T C G T A G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAATGATCATTAA-
AWWNTGCTGAGTCAT
 A C G T C G T A C G T A C T G A A C G T A C T G T C G A A C G T T A G C C G T A A C G T A C G T C G T A G C T A A C G T
C G T A C G T A C G T A G C A T G C A T T A C G G T A C G A C T A C T G C G T A A T C G A C G T G T A C C G T A A G C T