Information for 12-TGATAATTAGGYAGCT (Motif 12)

A G C T A C T G G T C A A C G T C T G A G T C A C A G T A G C T C G T A C A T G A C T G G A T C C G T A A C T G G T A C A C G T
Reverse Opposite:
T C G A C A T G A G T C G A C T C T A G T A G C G A T C G A C T C T G A G T C A C A G T A G C T G T C A A C G T G T A C C T G A
p-value:1e-11
log p-value:-2.689e+01
Information Content per bp:1.666
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif43.2
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets44.5 +/- 28.3bp
Average Position of motif in Background50.0 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0143.1_Pou2f1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGATAATTAGGYAGCT
ATATATTAATTAAGTA---
 A C G T A C G T A C G T A G C T A C T G G T C A A C G T C T G A G T C A C A G T A G C T C G T A C A T G A C T G G A T C C G T A A C T G G T A C A C G T
C T G A G A C T C T A G G C A T C T G A G C A T G C A T G T C A C G T A C G A T A C G T G C T A C T G A A C T G G C A T C G T A A C G T A C G T A C G T

Dlx1/MA0879.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGATAATTAGGYAGCT
-NNTAATTANN-----
 A G C T A C T G G T C A A C G T C T G A G T C A C A G T A G C T C G T A C A T G A C T G G A T C C G T A A C T G G T A C A C G T
A C G T T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

VSX2/MA0726.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGATAATTAGGYAGCT
--NTAATTAG------
 A G C T A C T G G T C A A C G T C T G A G T C A C A G T A G C T C G T A C A T G A C T G G A T C C G T A A C T G G T A C A C G T
A C G T A C G T T G A C G A C T C G T A C T G A A C G T C G A T C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TGATAATTAGGYAGCT
---TAATTAGN-----
 A G C T A C T G G T C A A C G T C T G A G T C A C A G T A G C T C G T A C A T G A C T G G A T C C G T A A C T G G T A C A C G T
A C G T A C G T A C G T A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C A C G T A C G T A C G T A C G T A C G T

VSX1/MA0725.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGATAATTAGGYAGCT
--NTAATTAG------
 A G C T A C T G G T C A A C G T C T G A G T C A C A G T A G C T C G T A C A T G A C T G G A T C C G T A A C T G G T A C A C G T
A C G T A C G T T G C A G A C T G T C A C T G A A G C T C A G T C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGATAATTAGGYAGCT
AAACATAATGAGGTTGC-
 A C G T A C G T A G C T A C T G G T C A A C G T C T G A G T C A C A G T A G C T C G T A C A T G A C T G G A T C C G T A A C T G G T A C A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C A C G T

EVX2/MA0888.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGATAATTAGGYAGCT
-GGTAATTAGC-----
 A G C T A C T G G T C A A C G T C T G A G T C A C A G T A G C T C G T A C A T G A C T G G A T C C G T A A C T G G T A C A C G T
A C G T T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C A C G T A C G T A C G T A C G T A C G T

EMX2/MA0886.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGATAATTAGGYAGCT
-GCTAATTAGC-----
 A G C T A C T G G T C A A C G T C T G A G T C A C A G T A G C T C G T A C A T G A C T G G A T C C G T A A C T G G T A C A C G T
A C G T T C A G A T G C G A C T G T C A C G T A A C G T A C G T C G T A T C A G A T G C A C G T A C G T A C G T A C G T A C G T

VAX1/MA0722.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGATAATTAGGYAGCT
--NTAATTAG------
 A G C T A C T G G T C A A C G T C T G A G T C A C A G T A G C T C G T A C A T G A C T G G A T C C G T A A C T G G T A C A C G T
A C G T A C G T C T A G G A C T G T C A G C T A C A G T C A G T C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

EMX1/MA0612.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGATAATTAGGYAGCT
-NNTAATTAGN-----
 A G C T A C T G G T C A A C G T C T G A G T C A C A G T A G C T C G T A C A T G A C T G G A T C C G T A A C T G G T A C A C G T
A C G T T C A G A T C G G A C T G T C A G C T A G C A T A G C T C T G A C T A G A C T G A C G T A C G T A C G T A C G T A C G T